KEGG T01379: ML5

Micromonospora sp. L5: ML5_1390

Entry

ML5_1390 CDS T01379

Definition

ATP dependent DNA ligase

Orthology

K01971

DNA ligase (ATP) [EC:6.5.1.1]

Organism

mil Micromonospora sp. L5

Pathway

mil03410	Base excision repair
mil03420	Nucleotide excision repair
mil03430	Mismatch repair
mil03450	Non-homologous end-joining

Class

Genetic Information Processing; Replication and repair; Base excision repair [PATH:mil03410]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:mil03420]
Genetic Information Processing; Replication and repair; Mismatch repair [PATH:mil03430]
Genetic Information Processing; Replication and repair; Non-homologous end-joining [PATH:mil03450]

SSDB

Motif

Pfam:

LigD_N DNA_ligase_A_M

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

complement(1407515..1408339)

AA seq 274 aa
MAGLLKVGSPPTEDHPMEYLTFHGEIPAGEYGGGRMIVHDTGTYRAEKWRDDEVIVVLDG
ERTKGRYVLFATGGRGRDWMIRRTDPAPEGWTPMPELVRPMLPAEGGRLPRDAAAWGYEL
RWAGVRAMAYVSGGRLRLLDGDDTEVTGEYPWTRAMAEALAPAEAVIDGVLVRIDPAGRV
RPPTRRDGQFLAVDLLWLEGVSSLDVPYAQRRDLLDGLALTGPHWQTPPWFPGVGADALW
AAREQGLPGVVAKRLDSPYEPGRRSRHWLSIDAS

NT seq 825 nt +upstreamnt +downstreamnt
atggccggtctcctcaaagtcggtagtccccctaccgaggaccacccgatggagtacctg
acgttccacggggagatccccgccggggagtacggcggcgggcggatgatcgtgcacgac
accggcacctaccgcgcggagaagtggcgcgacgacgaggtgatcgtggtgctggacggc
gagcgcacgaagggccggtacgtgctgttcgccaccggcggccggggccgggactggatg
atcaggcgtaccgacccggcgccggagggctggacgccgatgcccgagctggtccgcccg
atgctgcccgccgagggcgggcggctaccgcgcgacgccgccgcctgggggtacgagctg
cgctgggcgggcgtgcgcgcgatggcgtacgtctcgggcggccggctgcggctgctcgac
ggcgacgacacggaggtcaccggggagtacccgtggacacgggcgatggccgaggcgctg
gccccggccgaggcggtgatcgacggcgtgctggtaaggatcgacccggccgggagggtc
cgtccgccgacccggcgcgacgggcagttcctcgccgtcgacctgctctggctggagggc
gtgtccagcctcgacgtgccgtacgcgcaacgccgtgacctgctcgacggtctggcgctc
accggtccgcactggcagactccgccgtggttcccgggagtcggcgcggacgccctatgg
gccgcccgtgagcaggggctcccgggagtggtggcgaaacgcctcgactccccgtacgag
ccgggccggcgcagccggcactggctgagcatcgacgcgagctga

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-MIL (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (15)   

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