KEGG   Microbacterium sp. No. 7: AOA12_14525
Entry
AOA12_14525       CDS       T04102                                 
Name
(GenBank) ribonuclease
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
mio  Microbacterium sp. No. 7
Pathway
mio03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:mio00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    AOA12_14525
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mio03019]
    AOA12_14525
Messenger RNA biogenesis [BR:mio03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     AOA12_14525
SSDB
Motif
Pfam: RNase_J_C RMMBL Lactamase_B Lactamase_B_2 DUF1732
Other DBs
NCBI-ProteinID: ALJ21048
UniProt: A0A0P0DQZ6
Position
complement(3066675..3068348)
AA seq 557 aa
MTEVIEPPALQPGTLRVTPLGGLGEVGRNMTVFEFDGKLLIVDCGVLFPEEHQPGVDLIL
PDFEPIKGRLDDIVGVVLTHGHEDHIGAVPYLLRAKGDIPLIGSQLTLALVEAKLKEHRI
RPFSLTVAEGQREQVGPFDLEFIAVNHSIPDALAVAIRTPAGLALATGDFKMDQLPLDGR
ITDLRAFARLGEEGVDLFLVDSTNADVPGFTPLERAIGPVLDQVIGKAPRRVIVASFSSH
VHRVQQVIDAAVEHGRRVAFLGRSMVRNMTIAQDLGYLKVPDGVLIDYKKAKDLPDDRIV
YMSTGSQGEPMAVLSRMANLDHAIEPGPGDTVILASSLIPGNENAVYRVIDGLTKLGANV
VHKANAKVHVSGHAAAGELLYCYNILRPRNVLPVHGEYRHLIANAKLAQDTGIAPERTIV
GENGTVVDLRDGVARVVGQLDLGFVYVDGSSVGEITDADLKDRRILGEEGFISVIVVVDA
ATGRIITGPEIHARGFAEDDAVFDAVKPRIAAALTEAAQNGVRDNHALSQVVRRTIGRWV
NQSLRRRPMIVPLVIEA
NT seq 1674 nt   +upstreamnt  +downstreamnt
atgaccgaggtgatcgagccccccgccctccagcccggcacgctgcgggtcacgccgctc
ggcggcctcggcgaggtcggccgcaacatgacggtcttcgagttcgacggcaagctgctc
atcgtcgactgcggcgtgctgttccccgaagagcaccagccgggcgtcgacctgatcctg
cccgacttcgagcccatcaagggacggctcgacgacatcgtcggcgtcgtgctcacccac
gggcacgaagaccacatcggcgccgtcccgtacctgctgcgcgcgaagggcgacatcccg
ctgatcggctcgcagctcacgctcgcgctcgtcgaggcgaagctcaaggagcaccgcatc
cgcccgttctcgctcacggtcgccgagggccagcgcgagcaggtcggcccgttcgacctg
gagttcatcgcggtcaaccactccatccccgacgcgctcgccgtcgcgatccgcaccccg
gcgggcctcgcgctcgccacgggcgacttcaagatggaccagctgccgctcgacggccgc
atcaccgacctgcgcgcgttcgcgcggctcggcgaggagggcgtcgacctgttcctcgtc
gactccacgaacgccgacgtgcccgggttcacgccgctggagcgcgcgatcggccccgtg
ctcgaccaggtgatcggcaaggcgccgcgtcgcgtgatcgtcgcgagcttctcgagccac
gtgcaccgcgtgcagcaggtgatcgacgcggccgtcgagcacggccgccgcgtcgccttc
ctcggccgcagcatggtgcgcaacatgacgatcgcgcaggacctcggctacctcaaggtg
cccgacggcgtgctgatcgactacaagaaggcgaaggaccttcccgacgaccgtatcgtc
tacatgtcgacgggctcgcagggcgagccgatggcggtgctcagccgcatggccaacctc
gaccacgcgatcgagcccggtccgggcgacaccgtgatcctggcgtccagcctcatcccc
ggcaacgagaacgcggtgtaccgcgtcatcgacggcctcacgaagctcggcgcgaacgtc
gtgcacaaggcgaacgccaaggtgcacgtgtcgggccacgccgccgcgggggagctgctg
tactgctacaacatcctgcggccccgcaacgtgctgccggtgcacggcgagtaccgccac
ctcatcgcgaacgcgaagctcgcgcaggacaccggcatcgcgcccgagcgcacgatcgtc
ggcgagaacggcacggtcgtcgacctcagggacggcgtcgcgcgcgtcgtcggccagctc
gacctcggcttcgtctacgtcgacgggtcgagcgtgggcgagatcacggatgccgatctc
aaggaccgccgcatcctcggcgaggagggcttcatctcggtgatcgtcgtggtcgacgcc
gcgaccggccgcatcatcacgggccccgagatccatgcccgcggcttcgccgaggacgac
gccgtgttcgacgccgtcaagcccaggatcgccgccgcgctcaccgaggccgcgcagaac
ggcgtgcgcgacaaccacgcgctctcgcaggtcgtgcgccgcacgatcgggcgctgggtg
aaccagtcgctgcgccgccgtcccatgatcgtgccgctcgtcatcgaggcgtaa

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