KEGG   Micromonas commoda: MICPUN_59282
Entry
MICPUN_59282      CDS       T02695                                 
Name
(RefSeq) predicted protein
  KO
K03512  DNA polymerase lambda [EC:2.7.7.7 4.2.99.-]
Organism
mis  Micromonas commoda
Pathway
mis03410  Base excision repair
mis03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:mis00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    MICPUN_59282
   03450 Non-homologous end-joining
    MICPUN_59282
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mis03400]
    MICPUN_59282
Enzymes [BR:mis01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     MICPUN_59282
DNA repair and recombination proteins [BR:mis03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     MICPUN_59282
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    X-family DNA polymerases
     MICPUN_59282
SSDB
Motif
Pfam: DNA_pol_B_palm DNA_pol_B_thumb DNA_pol_lambd_f HHH_8 BRCT_2 LIG3_BRCT HHH_5
Other DBs
NCBI-GeneID: 8244498
NCBI-ProteinID: XP_002503211
JGI: MicpuN3_59282
UniProt: C1E884
Position
6:complement(join(546548..548709,548804..548870))
AA seq 742 aa
MDKNKSRRPKRDAQELCASIPSASPPRRRSRRRDLRDPSATPDRPFQQLGTQATANTLVL
GLPASLRAGDLEGGQPVPTQTQTQLPKPSLALPTQLIEQHATSSFADVDVESEGGVKVGG
DTYDFEHDEEEVDEALRRNEAAAARALGGEPRNSGGIERGDEGCVLNHESSRSPYRRLAE
MVAAASRRDVDGGAASVNPDRDPPAAAASPGDPKRFFSPVVAYFAPEVSKTRRGILGDRI
TERGGAVARDVNDPRVTHVLTTSTTYRHWNPAARLVSPDWAQACIRAGELRPEDEHPPAL
TGGVNPPASLSSSPLPPVASPMRLGPPPSSQDASQGHVVVDSGSGADGLVRPWLGKKRGA
FACQRPSTAAPVNLNPHITRPLEELAAIYEDVLGGTNAYKARHHKQVAGAVERLDFVVTD
VEQLCDPPVTPAFAQKTSTVRDKIRELLATGKLAKLEELKRKPDVEAVLELSGVWGIGTE
TARKLHREDGVSTVAQLRALAARQPGKLSANQHVGLRFYEEFKERIPRDEVEALAGHVED
AVAAVCPGCSVTVAGSYRRGKTSCGDVDVLLCPSEEFIRGGSQGAPGATVDTVEDILPAV
LARLRTRGVVTDDLSTGTVSWMGVARLPDSRERLAPTTTDGAEGDGAVAVVTPKRLHRRM
DIKTYTPDEMPFALLYFTGSGYFNRSMRTWADKAKGLSLHDRGFNLVRGNDMTAVRDAKF
RDERDVFEYLGLEYVPPEDRSV
NT seq 2229 nt   +upstreamnt  +downstreamnt
atggacaagaacaagagccggcggccgaagcgagacgcgcaggagctctgcgcgagcatc
ccctcggcctcgccgccccggcgaagaagccgacgccgcgatctccgggaccccagcgcg
accccggaccgccctttccagcagttgggcacccaggcgaccgcgaacacgctcgtcctc
ggccttcccgcgtccctgcgcgcgggcgacctcgaagggggacaaccggttccgacgcag
acgcaaacgcagctgccgaaaccgagcctcgcgttgcccacgcagctcatcgaacaacac
gcgacgtcctccttcgcggacgtcgacgtcgagagcgagggaggcgtcaaggtgggcggc
gatacgtacgatttcgagcacgatgaggaggaggtggacgaggcgctcaggaggaacgaa
gccgccgcggcccgggcgctcgggggagaaccccgaaactcgggaggaatcgagcgaggc
gacgaggggtgcgttttaaaccacgaatcctcgaggtcaccgtaccgcagactggcggag
atggtcgcggcggcgtccaggcgagatgttgacggcggcgcggcgtccgtgaaccccgat
cgcgacccgccggcggcagccgcgagcccgggggacccgaaacggttcttctcacccgtg
gtggcgtatttcgcgcccgaggtgagcaagacccgccggggcatcctcggagacaggatc
accgagagaggcggagccgtcgcgagggacgtgaacgatccgcgcgtgacgcacgtgttg
accacgtcgacgacgtaccggcactggaaccccgcggcgaggctggtatcgcccgactgg
gcgcaggcgtgcatccgcgcgggcgagctgaggcccgaggatgagcacccgccggcgctc
accggcggcgtgaacccgccggccagcctgagctcctcgcccctgccgcccgtcgcgtcg
cccatgcgcctcggtccgccgccttcgtctcaagacgcgtctcaagggcacgtcgtcgtc
gactctggatcgggcgccgacggtttggtgcgcccgtggttgggaaagaaaagaggcgcc
ttcgcgtgccagcgcccgtccaccgcggctcccgtcaacttgaacccccacatcacccgt
ccgctggaggaattggcggcgatatacgaggacgtcctggggggcacgaacgcgtacaag
gcgaggcaccacaagcaggtggcgggcgcggtggagaggctggatttcgtcgtgacggat
gtggaacagctgtgcgacccgccggtgactcccgcgtttgcgcagaagacgtccacggtg
cgagataagatccgcgagcttctcgcgacgggtaagctcgcgaagctcgaggagcttaaa
cgcaaaccggacgtcgaggccgtactggagctctccggggtgtggggcataggcacggag
acggcgcggaagctccaccgggaggacggcgtctccaccgtcgcgcagcttcgagcgctg
gcggcacgacaaccgggaaagctcagcgcgaatcagcacgtgggtctgaggttttacgag
gagttcaaggagcgaataccgcgcgacgaggtggaggctctggcgggccacgtcgaggac
gcggtcgcggccgtttgccccggctgctccgtcacggttgccggatcctaccgccgggga
aagacttcttgcggcgacgtcgacgtcttgctctgtcccagcgaggagttcatcaggggt
ggatcgcaaggagctccgggggcgacggtggatacggtggaggacatcttgcccgccgtt
ttggcgcggctgaggacgcgaggggtcgtgacggatgacctatcgacggggacggtgagc
tggatgggagtggccaggctcccggacagccgcgagcggctggcgccgacgacgacggac
ggggccgaaggcgacggtgccgtggcggtggtgactcccaagcgattacaccggcgcatg
gacataaagacgtacactccggatgagatgccgttcgcgctcctgtacttcacgggctcg
gggtacttcaaccggtccatgcgcacgtgggcggacaaggcaaaggggttaagcctacac
gacagggggttcaacctggtgcggggcaacgacatgaccgcggtgagggacgcgaagttc
agggacgagagggacgtgttcgagtacctcggactcgagtacgttccccccgaggacagg
agcgtttga

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