KEGG   Micromonas commoda: MICPUN_98964
Entry
MICPUN_98964      CDS       T02695                                 
Symbol
CPN-60
Name
(RefSeq) chaperonin 60 beta
  KO
K04077  chaperonin GroEL [EC:5.6.1.7]
Organism
mis  Micromonas commoda
Pathway
mis03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:mis00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    MICPUN_98964 (CPN-60)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mis03019]
    MICPUN_98964 (CPN-60)
   03110 Chaperones and folding catalysts [BR:mis03110]
    MICPUN_98964 (CPN-60)
   03029 Mitochondrial biogenesis [BR:mis03029]
    MICPUN_98964 (CPN-60)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:mis04147]
    MICPUN_98964 (CPN-60)
Enzymes [BR:mis01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.1  Enzymes altering polypeptide conformation or assembly
    5.6.1.7  chaperonin ATPase
     MICPUN_98964 (CPN-60)
Messenger RNA biogenesis [BR:mis03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     MICPUN_98964 (CPN-60)
Chaperones and folding catalysts [BR:mis03110]
 Heat shock proteins
  HSP60 / Chaperonin
   MICPUN_98964 (CPN-60)
Mitochondrial biogenesis [BR:mis03029]
 Mitochondrial protein import machinery
  Matrix
   Other matrix factors
    MICPUN_98964 (CPN-60)
Exosome [BR:mis04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   MICPUN_98964 (CPN-60)
  Exosomal proteins of other body fluids (saliva and urine)
   MICPUN_98964 (CPN-60)
  Exosomal proteins of breast cancer cells
   MICPUN_98964 (CPN-60)
  Exosomal proteins of colorectal cancer cells
   MICPUN_98964 (CPN-60)
  Exosomal proteins of bladder cancer cells
   MICPUN_98964 (CPN-60)
SSDB
Motif
Pfam: Cpn60_TCP1
Other DBs
NCBI-GeneID: 8240761
NCBI-ProteinID: XP_002500045
JGI: MicpuN3_98964
UniProt: C1E0I1
Position
2:complement(join(744229..745928,746193..746245,746562..746593))
AA seq 594 aa
MAMMMSALNTKVAVRPAALPRQMGSKLQAASAFPARRARVSTVIKAAKQLYFNAQDGTAL
KKMQKGVDKLAHVVGVTLGPKGRNVVLESKYGSPKIVNDGVTVAKEVDLEDPVENVGARL
VRQAAQKTNDLAGDGTTTATVLSAAMITEGMKIVMAGTNPVQLTRGMETTVAKLVGVLKG
LSKEVADEELANVAAVSAGGNMEVGMMISDAMAKVGRKGVITLEEAKSVDNNLIVVEGMQ
FDRGYISPYFVTDSERMTCDYDNCKLLLVDKKIKSARDMITILEEAIKSGFPLLVIAEDI
EQEALATLVVNKLRGALKICALKAPGFGERKSQYLEDIAILTGATVVKDELGLSLDKVGP
EVLGNAARVELGKESCTIVGDGSTELEVAARVKQINRLCEAAEAEYEKEKLNERAARLSG
GVAIIQCGAQTETELKEKKLRVEDALNATKAAVEEGIVIGGGCTLLKLAAAVDDIKKELP
NDEQKLGADIIQRALKYPMRLIAANAGDNGSVVVERVTASKDANFGYNAATGEFQDLMVN
GIIDPTKVIRCALENSCSVAKIFLTSDVVVCEIPENEPMIAGGAGAMDNSGYGM
NT seq 1785 nt   +upstreamnt  +downstreamnt
atggctatgatgatgtctgctctcaacaccaaggttgctgtgaggccggcggcgctcccc
cgccagatgggctccaagctccaggccgcctccgccttccccgctcgccgcgcccgcgtc
tccaccgtgatcaaggcggccaagcagctctacttcaacgcccaggacggcaccgcgctc
aagaagatgcagaagggcgtggacaagctcgcgcacgtcgtcggcgtgaccctcggaccc
aagggccgcaacgtcgtcctcgagtccaagtacggctcccccaagatcgtcaacgacggt
gtcaccgtcgccaaggaggttgacctcgaggatcccgtcgagaacgtcggcgcgcgcctc
gtccgccaggctgcgcagaagaccaacgacctcgcgggtgacggcaccaccaccgccacc
gtgctctccgcggcgatgatcaccgagggcatgaagatcgtcatggccggtaccaacccc
gtgcagctcacccgcggcatggagaccaccgtcgccaagctcgtcggtgtcctcaagggc
ctctccaaggaggttgccgacgaggagctcgccaacgtcgcggctgtctccgccggcggc
aacatggaggtgggcatgatgatctccgacgccatggccaaggtgggccgcaagggcgtc
atcaccctcgaggaggccaagtccgtggacaacaacctcatcgtcgtcgagggtatgcag
ttcgaccgcggctacatctccccctactttgtcaccgactcggagcgcatgacgtgcgac
tacgacaactgcaagctcctcctcgtcgacaagaagatcaagtccgcgcgcgacatgatc
accatcctcgaggaggcgatcaagtccggcttccccctcctcgtcatcgccgaggacatc
gagcaggaggccctcgccaccctcgtggtgaacaagctccgcggcgcgctgaagatttgc
gcgctcaaggctcccggctttggcgagcgcaagtcccagtacctcgaggacatcgccatc
ctcaccggcgccaccgtcgtcaaggatgagctcggcctctccctcgacaaggttggccct
gaggttctcggcaacgccgcgcgcgttgagctcggcaaggagtcctgcaccatcgtcggc
gacggctccaccgagctcgaggttgccgcgcgcgtgaagcagatcaaccgcctctgcgag
gctgccgaggctgagtacgagaaggagaagctcaacgagcgtgcggcccgcctctccggc
ggtgttgccatcatccagtgcggcgcccagaccgagaccgagctcaaggagaagaagctc
cgcgttgaggatgccctgaacgccaccaaggctgccgtcgaggagggcatcgtcattggc
ggcggctgcacccttctcaagctcgccgcggctgtcgacgacatcaagaaggagctcccc
aacgacgagcagaagctcggcgccgacatcatccagcgcgcgctcaagtaccccatgcgc
ctcatcgcggccaacgcgggtgacaacggctccgtcgtcgtcgagcgcgtcaccgcctcc
aaggatgccaactttggctacaacgccgccaccggcgagttccaggacctcatggtcaac
ggcatcatcgaccccaccaaggtgatccgctgcgccctcgagaactcctgctccgtcgcc
aagatcttcctcacctccgacgtggtggtgtgcgagatccccgagaatgagcccatgatt
gccggcggcgccggcgccatggacaactccggctacggcatgtaa

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Ontology (6)   
   KEGG BRITE (6)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (117)   
   KEGG ORTHOLOGY (1)   
   RefGene (111)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (130)   

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