KEGG   Mycobacterium intracellulare MOTT-02: OCO_32320
Entry
OCO_32320         CDS       T01754                                 
Name
(GenBank) DNA-directed RNA polymerase subunit omega
  KO
K03060  DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
Organism
mit  Mycobacterium intracellulare MOTT-02
Pathway
mit03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:mit00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    OCO_32320
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mit03021]
    OCO_32320
   03400 DNA repair and recombination proteins [BR:mit03400]
    OCO_32320
Enzymes [BR:mit01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     OCO_32320
Transcription machinery [BR:mit03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     OCO_32320
DNA repair and recombination proteins [BR:mit03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      OCO_32320
SSDB
Motif
Pfam: RNA_pol_Rpb6
Other DBs
NCBI-ProteinID: AFC49595
Position
complement(3484790..3485116)
AA seq 108 aa
MTIPQSDAALAAVPDRFDLSAGAPGAYDTPLGITNPPIDELLDRVSSKYALVIYAAKRAR
QINDYYNQLGEGILEYVGPLVEPGLQEKPLSIALREIHGDLLEHTEGE
NT seq 327 nt   +upstreamnt  +downstreamnt
gtgactattccgcagtccgacgccgcgctggccgccgtccccgaccggttcgacctgtcc
gccggggcgccgggcgcctacgacaccccgctgggcatcaccaacccgcccatcgacgag
ctgctggaccgggtctcgagcaagtacgccctggtcatctacgcggccaagcgggcccgt
cagatcaacgattactacaaccagctcggcgagggcatcctcgagtacgtggggccgctg
gtcgagccggggctgcaggagaagccgctctcgatcgcgctccgcgagatccacggcgac
ctgctcgagcacaccgagggcgagtaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (1)   
   Pfam (1)   
All databases (11)   

Download RDF
DBGET integrated database retrieval system