KEGG T00003: MJ

Methanocaldococcus jannaschii: MJ_0171

Entry

MJ_0171 CDS T00003

Definition

DNA ligase

Orthology

K10747

DNA ligase 1 [EC:6.5.1.1]

Organism

mja Methanocaldococcus jannaschii

Pathway

mja03030	DNA replication
mja03410	Base excision repair
mja03420	Nucleotide excision repair
mja03430	Mismatch repair

Class

Genetic Information Processing; Replication and repair; DNA replication [PATH:mja03030]
Genetic Information Processing; Replication and repair; Base excision repair [PATH:mja03410]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:mja03420]
Genetic Information Processing; Replication and repair; Mismatch repair [PATH:mja03430]

SSDB

Motif

Pfam:

DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C mRNA_cap_enzyme

Other DBs

NCBI-GI:

NCBI-GeneID:

JCVI-CMR:

UniProt:

Position

complement(173302..175023)

AA seq 573 aa
MLWRDVCEIFNKIEKTTKRLEKRDYFIKLIDMVKEKGKPEDLKKICYMAIGRVYPEYDER
ELGIGEKLLINAVTSIGIKKDELLEKIKETGDIGLAIEQLKSKIKQASLFFQPLTVDEVY
ETLKRVGEIEGEGSQKKKLRLISSLFLRASPIECRYLARLILEDMRIGMNVPTILDALSV
YFNVPKEKLEKIYAITNDIGLLAEKLLMGDLESEELKLKLFRPIKPMLAQLTPSIEEALL
EMGRAQFETKYDGARVQIHKDGNKVKIYSRRLEDVTNALPEIVEAVKNINVDKLIVEGEC
VAIDKQTGKPRPFQDILRRFRRKYDIGKMMKEINLRVYLFDILYKDGVSFIDEEFEKRRK
VLEEIVGYENDWRTERKRIEKELKSDKIIDISYKLVTNDAKEAREFYNWSLSIGHEGVMI
KNLKAPYTPGSRVRTMYKFKPTLESLDVVITKAKRGMGKRKDWYGSFEICVRDEEGNLYP
IGHVGTGLTEADLEFLKEEIDKIIIRDLGEEVEVEPKIVIEVAYEEIQKSDKYPCGYALR
FPRVVRFRFDKGVNEINTIEDVERIYEIQRGRK

NT seq 1722 nt +upstreamnt +downstreamnt
atgctttggagagatgtttgtgaaatatttaataaaattgaaaaaacaacaaaaaggttg
gaaaagagagattattttataaaattaattgacatggttaaagagaaagggaagccagag
gatttaaaaaagatttgttatatggctatagggagggtttatcccgaatacgatgagaga
gagttaggaattggagaaaaacttttaataaatgctgttacatctataggaattaagaaa
gatgaattgttagagaaaattaaagagacgggagatattggattggcaatagagcaatta
aaatcaaagattaagcaagcatctttattttttcagccattaactgtagatgaggtttat
gaaaccttaaagagggttggggagatagagggagaaggttctcaaaagaaaaagttgagg
ttaataagtagtctctttttaagagcttcaccaatagagtgcaggtatttggcaaggtta
attttggaagatatgaggatagggatgaatgttccaactatattagatgctttgtcagtt
tatttcaatgttccaaaggaaaaacttgagaagatatatgctataaccaatgatattggg
cttttagctgagaaattattaatgggagatttagaaagtgaggagctaaaattaaaatta
tttagaccaataaaaccaatgttggctcaattaactccttcaattgaagaggcattattg
gagatgggcagagctcaatttgaaacaaagtatgatggagcaagagttcaaatacataag
gatggaaataaagttaagatatatagcaggagattggaggatgttacaaatgcccttcca
gagattgttgaggcggtaaaaaatattaatgtagataaattaattgttgaaggggagtgt
gtagctatagataaacaaacaggaaagccaagacctttccaagatatacttagaagattt
aggagaaagtatgatattggaaagatgatgaaggaaataaatttgagagtttatttgttt
gatattctttataaagatggagtatcatttatagatgaggaatttgaaaagagaagaaaa
gttttagaggaaattgttggttatgagaatgattggagaactgaaagaaagaggatagag
aaagagcttaaatcagataaaataattgatatatcctataaattagtcacaaacgatgca
aaagaggcaagagaattttataactggtctctatctattgggcatgagggagttatgatt
aaaaatttaaaggctccttataccccaggaagtagagttagaacaatgtataaatttaaa
ccaactcttgagagtttagatgtcgtaattacaaaggcaaagagagggatggggaagaga
aaggattggtatggttcatttgaaatatgtgttagagatgaggaagggaacctctaccct
attggacatgtagggactggactaactgaggcagatttagagtttttgaaagaagagatt
gataaaattattattagagatttaggtgaagaggttgaagtagaaccaaagatagttatt
gaagttgcttatgaagaaattcaaaaatctgataaatatccttgtggctatgctttgaga
ttcccaagggttgtaagatttagatttgataagggagttaatgagataaacactatagag
gatgttgaaaggatatatgaaatccaaagaggaaggaaataa

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JCVI-CMR (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (17)   

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