KEGG T01512: JDM601

Mycobacterium sp. JDM601: JDM601_0642

Entry

JDM601_0642 CDS T01512

Gene name

recD

Definition

exodeoxyribonuclease V subunit RecD

Orthology

K03581

exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]

Organism

mjd Mycobacterium sp. JDM601

Pathway

mjd03440

Homologous recombination

Class

Genetic Information Processing; Replication and repair; Homologous recombination [PATH:mjd03440]

SSDB

Motif

Pfam:

AAA_30 UvrD_C_2 AAA_19 AAA_11 Helicase_RecD Viral_helicase1 AAA_22 PhoH UvrD-helicase AAA_28 AAA_25 DUF2075 AAA_16 AAA_29 NTPase_1 Mg_chelatase SRP54 AAA_5 Herpes_Helicase NACHT cobW KaiC CbiA AAA

Other DBs

NCBI-GI:

333989282

NCBI-GeneID:

10682637

UniProt:

F5Z3B6

Position

complement(683046..684800)

AA seq 584 aa
MNTELDPLSWRVARGATGVLREFNEAGVLEAADVHTAQRLCALGAESDETVALAVALAVR
ALRTGSVCVELATVADGTESPELSWPEPAAWLAAVRASSLVAKQVLRIYDNDSGGLLYLD
RYWREEEQVCADLLALSTPQDGSVELPGLERLFPPDHDDQRAAAEIALTQAVTVLTGGPG
TGKTTTVARLLALLAEQAAASGRRPLRIALAAPTGKAAARLTEAVAGVVAGLEPKDQARL
AGLQASTLHSLLGSRPGNSARFKHNRGNRLPHDVIVVDETSMVSLTLMARLLEAVRPTAR
LILVGDPDQLASVEAGAVLADLVDGLAARPGTRVATLVTAHRYKKAIGELASAIRAGDGD
TVIELLRSGDEHREWLDASTPAALGDQLAAIAVPHALRVRQAALLGDAGEALRNLDEHRL
LCAHRDGPHGANHWNHQIRRWVSEQTGDPVWADWYAGRPLLVTANDYGLGVRNGDTGVVV
ARADGLRAVIATASGAVDFATGRLSDVDSMYAMTIHKSQGSEADVVTVLMPPVESRLLTR
ELFYTAVTRAKHQVRVIGSEDEIRAALDRRAVRASGLALRLREA

NT seq 1755 nt +upstreamnt +downstreamnt
atgaacaccgagcttgatccactgtcgtggcgggtggcgcgcggcgccaccggcgtgctg
cgcgagttcaacgaggccggcgtgctggaagccgcggatgtgcataccgcccaacggctc
tgcgcgctgggcgccgaatccgacgagacggtggcgttggcggtggcgctggcggtgcgg
gcgttgcgcaccggctcggtctgcgtggagctggccaccgtggccgacggcaccgagtct
cccgagctgagttggccggagccggcggcctggctggcggcggtgcgcgccagctcgctg
gtcgccaagcaggtgttgcgcatctacgacaacgattcgggcgggctgctgtatctggac
cgctattggcgtgaggaggagcaggtctgcgccgacctgctggcgctgtcgacgccgcag
gacggttcggtcgagctgcccgggctcgaacggctgtttccgccggaccacgacgaccag
cgcgccgccgccgagatcgcgttgacgcaggcggtcacggtgctcaccggcggcccgggg
accggcaagaccaccacggtggcccggttgctggcactgctggccgaacaggccgcggcg
tccgggcggcgaccgttgcggatcgcgctggccgccccgaccggcaaggccgcggcccgg
ctgaccgaggcggtcgccggggtggtggccgggctcgagccgaaagatcaggcccgactg
gctgggctgcaggccagcacgttgcactcgctgctgggttcgcgaccgggaaattcggcg
cggttcaagcacaatcgcggcaaccggctgccgcacgacgtgatcgtggtcgacgagacg
tcgatggtgtcgctgacgctgatggcccggctgttggaggcggtgcggcccaccgcccgg
ctgatcctggtgggcgaccccgaccagttggcgtcggtggaggccggtgcggtgctggcc
gacctggtggacggcttggccgcccgcccgggcacccgggtggcgacgctggtgaccgcg
caccgctacaagaaggcgatcggtgagctggcctcggcgatccgcgccggcgacggcgac
accgtgatcgagctgctgcgctccggcgacgagcaccgggaatggctcgacgcgtcgacc
ccggccgcgctgggcgaccagctggcggcgatcgcggtgccgcacgcgttgcgggtgcgc
caggcggcgctgctcggcgatgccggcgaggcgttgcgcaacctcgacgagcaccggctg
ttgtgcgcgcaccgcgacggcccgcacggggccaaccactggaaccatcagattcggcgg
tgggtgtccgagcagaccggggatccggtgtgggcggactggtatgccgggcggccgctg
ctggtcaccgccaacgattacgggctgggcgtgcgcaacggcgacaccggggtggtcgtg
gcccgcgccgacgggctgcgggcggtgatcgcgacggcgtccggtgcggtggatttcgcc
accggccggctctccgacgtcgacagcatgtacgcgatgaccattcacaagagccagggc
agcgaagccgatgtggtgaccgtgctgatgcccccggtggagtcgcggctgctgacccgc
gagctgttctacaccgcggtgacccgcgccaaacaccaggtgcgggtgatcggctccgag
gacgagatccgtgccgcgctggatcggcgggcggtgcgggcgtccgggctggcgctgcgg
ttgcgtgaggcctga

All links

Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (24)   
   Pfam (24)   
All databases (33)   

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