KEGG   Mycobacterium sp. JDM601: JDM601_0890Help
Entry
JDM601_0890       CDS       T01512                                 

Definition
formamidopyrimidine-DNA glycosylase
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
mjd  Mycobacterium sp. JDM601
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:mjd00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    JDM601_0890
Enzymes [BR:mjd01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     JDM601_0890
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     JDM601_0890
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
958830..959693
Genome map
AA seq 287 aa AA seqDB search
MPELPEVEALADHLRRHAVGCSIGRIDVAAFSVLKTFDPSPTALHGQTVTGARRWGKYLG
LEVGDLFLIAHLSRAGWLRWSDKLAPAPLRPGKGPIALRVHLGAPGQAPGFDLTEAGTQK
RLAVWLVDDPDKVPGIAGLGPDALEVTADELVALLTGNTGRIKTVITDQKVLAGIGNAYS
DEILHTARLSPFATAAKLSDEQVAALHQAMQAVLADAVARSVGQQAATLKGEKRSGMRVH
ARTGLPCPVCGDTVREISFADKSFQYCPTCQTGGKVLADRRMSRLLK
NT seq 864 nt NT seq  +upstreamnt  +downstreamnt
atgccggaactgcccgaagtcgaggccctcgccgaccacctgcgcaggcatgcggtgggg
tgcagcatcggccgcatcgacgtggcggcgttctcggtgctcaagaccttcgacccgtcg
cccacggcgttgcacggccagaccgtcaccggggcgcgccgctggggtaagtacctcggc
ctagaagtcggcgacctgttcctgatcgcgcacctgtcccgggcgggctggctgcgctgg
tcggacaagctggcgccggcgccgctgcgccccgggaaagggccgatcgcgctgcgggtg
cacctgggcgccccggggcaggcgccggggttcgacctcaccgaggcaggcacccagaaa
cgcctcgcggtctggctggtcgacgatccggacaaggttccgggcatcgccggtctcgga
cccgacgcgttggaggtgacggccgacgagttggtcgcgctgctgaccggcaacaccggc
cgcatcaagacggtcatcaccgaccagaaggtgctcgccggtatcggcaacgcctacagc
gatgaaatactgcacaccgcgcgtctttcgccgttcgccaccgccgccaagttgtccgat
gaacaggtcgccgccctgcaccaggcgatgcaagccgttcttgccgacgcggttgcccgt
tccgtcggccagcaggccgccacgctcaagggcgaaaagcgctccgggatgcgggtgcac
gcccggaccgggttgccctgtccggtctgcggcgacaccgttcgagaaatatcgttcgcc
gataagtcttttcagtactgcccgacctgtcagacgggtggcaaagtgctggccgaccga
cggatgtcgcggctgctcaagtag

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