KEGG   Mycobacterium sp. KMS: Mkms_1996Help
Entry
Mkms_1996         CDS       T00442                                 

Definition
(GenBank) DNA-(apurinic or apyrimidinic site) lyase (EC:4.2.99.18)
  KO
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
mkm  Mycobacterium sp. KMS
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:mkm00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    Mkms_1996
Enzymes [BR:mkm01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     Mkms_1996
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     Mkms_1996
DNA repair and recombination proteins [BR:mkm03400]
 Prokaryotic Type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     Mkms_1996
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-ProteinID: 
JGI: 
UniProt: 
Position
2115384..2116274
Genome map
AA seq 296 aa AA seqDB search
MPELPEVEVVRRGLDAHVTGKAITAVRVHHPRAVRRHEAGPADLTARLLGMRITGTGRRG
KYLWLTLDDGDEPLARRAESSVALVVHLGMSGQMLLGPIPKEDHLRIAALFDDGTALSFV
DQRTFGGWLLADLVTVDGTDVPVPVAHVARDPLDPRFDRDAVVKVLRGKHSEIKRQLLDQ
TVVSGIGNIYADEALWRAKVNGARLAESLTKPKLAEILDHAADVMRDALGQGGTSFDSLY
VNVNGESGYFDRSLDAYGREGEPCRRCGAIMRRDKFMNRSSFYCPRCQPRPRVRRA
NT seq 891 nt NT seq  +upstreamnt  +downstreamnt
atgccagaactccccgaggtcgaggtcgtccggcgcggtctggacgcccacgtcaccggt
aaggcgatcaccgccgtgcgggtgcaccatccgcgggcggtgcgtcgccacgaagcgggg
cccgccgatctgacggcgcggctgctcggtatgcggatcaccggcaccggcaggcgcggc
aagtatctgtggctcaccctggacgacggcgatgagccgcttgcgcgaagagcggaaagc
agcgtggcgctggtggtgcacctcgggatgagcgggcagatgctgctcgggcccatcccg
aaagaggaccacctgcgcatcgccgcgctgttcgacgacgggaccgcgctgagcttcgtc
gaccagcggaccttcggcggctggctgctcgccgacctggtgaccgtcgacggcaccgac
gtgccggtgccggtcgcgcacgtcgcccgcgacccgctggatccgcggttcgaccgcgat
gcggtggtaaaggtgttgcgcggcaagcattccgagatcaaacgccagttgctcgaccag
accgtcgtatcggggatcggcaacatctacgccgacgaggcgctgtggcgggccaaggtc
aacggggcccggctggccgagtcgctgaccaagcccaagctcgccgagatcctcgaccac
gcggccgacgtcatgcgcgacgcgctcggacagggcggcacgtcgttcgactcgctctac
gtcaacgtcaacggcgaatccggatacttcgaccggtcgctggacgcctacggccgcgag
ggtgagccgtgccggcgctgcggggcgatcatgcgccgcgacaaattcatgaaccgctcg
tcgttctactgcccgcgctgccagccccgcccgcgggtgcgccgcgcctga

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