KEGG T00442: Mkms

Mycobacterium sp. KMS: Mkms_5930

Entry

Mkms_5930 CDS T00442

Definition

DNA ligase (ATP) (EC:6.5.1.1)

Orthology

K01971

DNA ligase (ATP) [EC:6.5.1.1]

Organism

mkm Mycobacterium sp. KMS

Pathway

mkm03410	Base excision repair
mkm03420	Nucleotide excision repair
mkm03430	Mismatch repair
mkm03450	Non-homologous end-joining

Class

Genetic Information Processing; Replication and repair; Base excision repair [PATH:mkm03410]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:mkm03420]
Genetic Information Processing; Replication and repair; Mismatch repair [PATH:mkm03430]
Genetic Information Processing; Replication and repair; Non-homologous end-joining [PATH:mkm03450]

SSDB

Motif

Pfam:

DNA_ligase_A_M DNA_ligase_A_C

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

pMKMS02:complement(125440..126429)

AA seq 329 aa
MPSRSKLSVRDPAFAPMLATLGAAPSGAAHATEWKFDGQRATVVVEHGAVVVFTRNGMEV
TRTFPELQSIAAAVGDRRMVLDGEIVALDTEGRPSFTRLQRRWPQQRRPSAELLREVPCR
VMAFDVLRLDGRDTTALPYIERRELLDDVMVAKSRVLTVPAALHDVDPADALEAAALHGM
EGIVVKRLDSPYRPGQRSPDWTKVPVRATCELLIAGYWCAGGPGGRSCVGSLLVAGYNPD
GDLVAIGQVGTGFSATTRRRLFDQLQPIRRTTSPVANRVELSGVRFVEPCYVAEIAYREY
VPGRWLRHASFKGCREVADLSQIQIPNCA

NT seq 990 nt +upstreamnt +downstreamnt
gtgcccagcaggtccaagctctctgtgcgcgaccccgcgttcgcgccgatgctggccacc
ctgggcgccgcaccctccggcgccgcccatgccaccgagtggaaatttgacgggcagcgc
gcgaccgtcgtcgtcgagcacggcgcggtggtggtgttcacccgcaacgggatggaagtg
actcgaaccttccctgaacttcagtcgatcgccgcggcggtcggcgatcgccgcatggtg
ctcgacggcgaaatcgtggccctcgacaccgaaggccggccgtcgttcacccggctgcag
cgccgttggccccagcagcgccgacccagcgccgagctgctccgcgaggtgccctgccgc
gtgatggccttcgacgtcctgcggctcgacggccgcgacaccaccgcactgccctacatc
gagcgccgcgagctgctcgacgacgtgatggtggccaagtcgcgtgtcctgaccgtgccg
gccgccctgcacgacgtggaccccgcagacgcactcgaggcggccgcgctgcacggcatg
gaaggcatcgtggtcaagaggctcgactcgccgtaccggcccgggcagcgcagccccgac
tggacgaaagtcccggtccgcgccacctgcgagctgctgatcgccggctattggtgtgcc
ggcggcccgggcggacgcagctgtgtgggctcgctgctggtggccggctacaaccccgac
ggcgacctggtagccattggccaggtcggcaccgggttcagcgccaccacccgccggcgg
ctgttcgaccagctgcagccgatccggcgcaccacctcacccgtcgccaaccgggtcgag
ctgtccggcgtgcggttcgtggaaccgtgctacgtcgccgagatcgcctaccgcgaatac
gttccgggccgctggctgcggcacgcctcattcaagggttgccgcgaggtggcggacctc
tcgcagattcagatcccgaactgcgcatag

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-MKM (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (15)   

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