KEGG   Methylomonas koyamae: MKLM6_0267
Entry
MKLM6_0267        CDS       T05118                                 
Name
(GenBank) ribonucleoside-diphosphate reductase subunit alpha
  KO
K00525  ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
Organism
mko  Methylomonas koyamae
Pathway
mko00230  Purine metabolism
mko00240  Pyrimidine metabolism
mko01100  Metabolic pathways
mko01232  Nucleotide metabolism
Module
mko_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP
mko_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP
Brite
KEGG Orthology (KO) [BR:mko00001]
 09100 Metabolism
  09104 Nucleotide metabolism
   00230 Purine metabolism
    MKLM6_0267
   00240 Pyrimidine metabolism
    MKLM6_0267
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mko03400]
    MKLM6_0267
Enzymes [BR:mko01000]
 1. Oxidoreductases
  1.17  Acting on CH or CH2 groups
   1.17.4  With a disulfide as acceptor
    1.17.4.1  ribonucleoside-diphosphate reductase
     MKLM6_0267
DNA repair and recombination proteins [BR:mko03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   Modulation of nucleotide pools
    MKLM6_0267
SSDB
Motif
Pfam: Ribonuc_red_lgC Ribonuc_red_lgN ATP-cone
Other DBs
NCBI-ProteinID: ATG88549
UniProt: A0A291IEC7
Position
300137..302929
AA seq 930 aa
MDSAAQPASFYPDPAEAVKHAPSYPTDSGLEVIRRNRAVVAFQPEKIAIAITKAFLAVEG
QHSVNSARIREQVAQLTASVVEALTRRLPGGGTVHIEDIQDQVELALMRSGAHDVARAYV
LYREKHAAQRAAQQTSEHVAPRLYVDDQGQRRPLDSDAFSALCREACADLAGVDAERVWT
ETLTNLYDGMPLVAVRQALVLAARTLIEIEPNYGKVAARLLLSQLRLEAAGSALNQAAMA
EAYAGCFTEFIAAGVAAELLDPRLAEFDLDRLGQALVAERDLQFDYLGLQTLYDRYFLHV
DGRRIELPQCFFMRVAMGLALHEIDREARATEFYRLLSSFDFMCSTPTLFNSGTRHPQLS
SCYLTTVSDDLDGIYQSIKENALLQKYAGGLGNDWTPVRALGSRIKGTNGHSQGVIPFLK
VVNDTAVAVNQGGKRKGAVCAYLENWHLDFEEFLELRKNTGDERRRCHDMNTAAWVSDLF
MQRVRDNAEWTLFSPVDTPDLHDLYGAAFAEAYQAYETKADRGEIKLYKRIGAVQLWRKM
LTMLFETGHPWITFKDACNLRSPQQHAGVIHSSNLCTEITLNTSADETAVCNLGSVNLAA
HLVEHDGTWQLDAGKLQRTVATAMRMLDNVVDINFYATPKARNANLRHRPVGLGMMGFSD
CLHQLGLAYASQEAVEFADYSAELLSYYAYQASADLAEQRGRYSSFSGSLWQQGLLPPDT
LERLSETRGDLGVVAGGRLDWDALRQRIAQVGMRNSNCVAIAPTATISNIVGVSAAIEPV
YQNLYVKSNLSGEFIVVNAALVRELKALGLWDAVMVADLKYFDGSLAAIERVPADIKARY
ATAFEIDPEWLIEAAARRQKWIDQSQSLNLYVAAPTGSKLDQMYRLAWQRGLKTTYYLRT
LGATAMEKTGGDDSTPKVCSITDPDCEACQ
NT seq 2793 nt   +upstreamnt  +downstreamnt
atggatagcgccgctcaacccgccagtttttatcccgaccctgccgaagccgttaaacac
gccccctcgtatccaacggatagcggcttggaagtgattcgccgcaaccgtgccgtggtt
gcgtttcagccggaaaaaatcgccatcgccatcaccaaggccttcttggccgtggaaggc
cagcacagcgtcaattcggcgcgcatccgcgaacaggtggcgcaactgactgccagcgtg
gtcgaggccttgacgcggcgtttgcccggcggcggcacggtgcatatcgaggatattcag
gaccaagtggaactggcgttgatgcgttccggcgcccacgacgtggcccgtgcgtatgtg
ctgtatcgggaaaagcacgcggctcagcgcgcggcgcaacaaacatccgagcatgtcgca
cccaggttgtatgtagacgaccaaggccaacgccggccgctggacagcgacgctttcagc
gcgctgtgccgcgaggcttgcgcggatttggcgggtgtcgatgccgaacgggtctggacc
gaaaccttgaccaatctctacgacggcatgccgctggtggcggtgcgtcaggccttggtg
ttggcggcgcggaccttgatcgaaatcgaaccgaactacggcaaagtcgctgcgcgcttg
ctgttgagccaactgcgcctggaagctgccggttcggccttaaaccaagccgccatggcc
gaagcgtatgccggctgctttaccgagttcatcgccgccggcgtcgccgccgaattgctc
gatccgcgcctggccgaatttgacctggaccggctgggccaagcgctagtcgccgagcgc
gatctgcaattcgattatctgggcctgcaaaccctgtacgaccgctatttcctgcatgtc
gatggccgtcgcatcgaattgccgcagtgctttttcatgcgggtggcgatgggcttggcc
ttgcacgagatcgaccgcgaggcgcgcgctaccgaattttaccgcttgctatcgagcttc
gactttatgtgttcgacgccgaccttgttcaacagcggcacccgccatccgcaattgtcg
tcgtgctatctgaccacagtctccgacgatcttgacggtatttaccaaagcatcaaggaa
aacgcgctgctgcaaaaatacgccgggggcctgggtaacgactggacgccggtgcgggcg
ctgggcagccggatcaagggcaccaacggccacagccagggcgtgattccgttcttgaag
gtggtcaacgacaccgccgttgccgtcaaccagggcggcaagcgcaagggcgcggtgtgc
gcctatctggaaaactggcacctggatttcgaggaatttctggagctacgcaagaacacc
ggcgacgagcgccgccgctgccacgacatgaacaccgcagcctgggtgtctgacttgttc
atgcaacgagtgcgcgataacgccgaatggaccttgttttcgccggtggatacgccggac
ttgcatgacttatacggtgcggccttcgccgaggcctatcaagcttacgaaaccaaggcc
gatcgcggcgagatcaagttgtataagcgcatcggcgccgtgcagctttggcgcaagatg
ctgaccatgctgttcgaaaccggccatccgtggatcacgttcaaggatgcctgcaatctg
cgttcgccgcaacagcatgccggggtgattcacagttccaacctgtgcaccgaaatcacg
ctgaatacctcggccgacgaaacggcggtttgcaacctgggctcggttaatctggccgcg
cacttggtcgaacatgacggcacctggcaactggacgccggcaaattgcagcgcaccgtc
gccaccgcaatgcggatgctggacaacgtcgtcgacatcaatttttacgcgacgcccaag
gcgcgcaacgccaacctgcgccaccgtccagtcggactgggcatgatggggttctccgat
tgcttgcatcaactggggctcgcttacgccagccaggaagcggtggagttcgctgattat
tcggccgaattgctgagctattatgcctatcaagcctcggccgatttggccgagcaacgc
ggccgctacagcagctttagcggcagtctgtggcagcaagggctattaccaccggatacg
ctggaacgtctgagcgaaacgcgcggcgatctgggcgtggtcgcgggcgggcggctggac
tgggacgcgctgcgtcaacgcattgctcaggtggggatgcgcaattccaattgcgtggcg
attgcgccgaccgcgacgatttccaacatcgtcggcgtgtcggcggccattgagccggtc
tatcagaatctttacgtcaaatccaacctgtccggcgagtttatcgtggtcaatgccgca
ctggtgcgcgaattgaaagctctgggtttatgggatgcggtgatggtggcggacctgaaa
tacttcgacggctcgctggcggccatcgagcgggtgccggccgacatcaaggcccgctat
gccaccgccttcgaaatcgacccggaatggctgatcgaagccgccgcgcgccgacaaaaa
tggatagatcagtcgcaatcgttgaatctctacgtcgccgcaccgaccggcagcaagctg
gatcagatgtaccgactggcctggcagcgcggcttgaagaccacctattacctgcgcacc
ttgggcgcgacggcgatggagaaaacgggcggcgacgactcgacgcccaaggtttgctcg
attaccgatcctgattgcgaggcctgccaatga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (6)   
   KEGG PATHWAY (4)   
   KEGG MODULE (2)   
Chemical substance (11)   
   KEGG COMPOUND (11)   
Chemical reaction (5)   
   KEGG ENZYME (1)   
   KEGG REACTION (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (33)   

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