KEGG   Mesorhizobium japonicum MAFF 303099: mll3895
Entry
mll3895           CDS       T00043                                 
Name
(GenBank) Holliday branch migration protein; RuvB
  KO
K03551  holliday junction DNA helicase RuvB [EC:5.6.2.4]
Organism
mlo  Mesorhizobium japonicum MAFF 303099
Pathway
mlo03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:mlo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    mll3895
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mlo03400]
    mll3895
Enzymes [BR:mlo01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     mll3895
DNA repair and recombination proteins [BR:mlo03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     mll3895
    RecFOR pathway proteins
     mll3895
SSDB
Motif
Pfam: RuvB_N AAA_lid_4 RuvB_C AAA AAA_5 TIP49 Mg_chelatase AAA_3 AAA_14 AAA_22 AAA_2 AAA_16 Rad17 AAA_17 nSTAND3 AAA_18 RNA_helicase AAA_28 TsaE AAA_33 Sigma54_activ_2 NTPase_1 IstB_IS21 NB-ARC AAA_24 AAA_25 Cytidylate_kin ABC_tran AAA_7 NACHT
Other DBs
NCBI-ProteinID: BAB50691
RhizoBase: mll3895
UniProt: Q98F76
Position
complement(3132366..3133403)
AA seq 345 aa
MSLSPRLIAPEKRGEDADQTLRPQTLADFVGQAAVRANLKVFIEAAKGRNEALDHVLFVG
PPGLGKTTLAQIMARELGVNFRSTSGPVIAKAGDLAALLTNLEEGDVLFIDEIHRLNPAV
EEILYPAMEDFQLDLIIGEGPAARSVKIDLARFTLVAATTRLGLLTNPLRDRFGIPVRLN
FYTVEELEQIVRRGARILQMPLGDDGALEIARRARGTPRIAGRLLRRVRDFASVAGDGHV
DRLIADEALTRLEVDALGLDALDRRYLSMIARNFGGGPVGIETIAAGLSEPRDAIEDIIE
PYLIQQGFIQRTPRGRMLTANAWRHLGLDAPKDLAQQQINLFQEE
NT seq 1038 nt   +upstreamnt  +downstreamnt
atgagcctgtcgccccgtctcattgcgccggaaaaacgcggcgaggatgccgatcagacc
ttgcggccgcagacgctcgccgactttgtcggccaggcggcggtgcgggccaatctcaaa
gtcttcatcgaggccgccaagggccgcaacgaggcgctcgaccatgtgctgttcgtcggg
ccgccggggctgggcaagacgacgctggcgcagatcatggcgcgcgaactcggcgtcaat
ttccgctcgacgtccggaccggtcatcgccaaggccggcgatctcgccgcattgctcacc
aatctcgaagaaggtgatgtgctgttcatcgacgagatccaccggctcaatcctgcggtg
gaggaaattctctatccggcgatggaggatttccagctcgacctgatcatcggcgagggg
ccggcggcgcgttcggtcaagatcgacctcgcccgtttcaccctcgtcgccgccaccacg
cgacttggcctgctcaccaatccgctgcgcgaccgattcggcattccggtgcggctcaat
ttctatacggtcgaggaactggagcagatcgtccgtcgcggcgcgcgcatcctgcaaatg
ccgctcggcgacgatggcgcgctggagatcgcgcggcgcgcgcgcggcacgccgcgcatc
gcggggcggttgctgcgccgcgtgcgcgatttcgcctcggtcgccggcgacggccatgtc
gaccgtctcatcgccgacgaggcgctgacccggcttgaggtcgatgcgctcggcctggac
gcgctcgaccgccgctatctctcgatgatcgcccgcaatttcggcggcgggccagtcggc
atcgagacgatcgccgctgggctgtccgagccgcgcgatgccatcgaggacatcatcgag
ccttatctgatccaacaaggcttcatccagcgcacgccgcgcggccgcatgctgacggcc
aacgcctggcgccatctcggcctcgacgcgccgaaggatttggcgcagcagcagatcaac
ctgttccaggaagaatag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   RefGene (3)   
   NCBI-PROTEINID (1)   
   OC (1)   
   RHIZOBASE (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (30)   
   Pfam (30)   
All databases (45)   

Download RDF
DBGET integrated database retrieval system