KEGG M.loti: mlr0277

Mesorhizobium loti: mlr0277

Entry

mlr0277 CDS M.loti

Definition DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6)

Orthology K03046 DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]

Pathway mlo00230 Purine metabolism
mlo00240 Pyrimidine metabolism
mlo01100 Metabolic pathways
mlo03020 RNA polymerase

Class Metabolism; Nucleotide Metabolism; Purine metabolism [PATH:mlo00230]
Metabolism; Nucleotide Metabolism; Pyrimidine metabolism
[PATH:mlo00240]
Genetic Information Processing; Transcription; RNA polymerase
[PATH:mlo03020]
Genetic Information Processing; Replication and Repair; DNA repair
and recombination proteins

SSDB

Motif Pfam: RNA_pol_Rpb1_1 RNA_pol_Rpb1_5 RNA_pol_Rpb1_2 RNA_pol_Rpb1_3
RNA_pol_Rpb1_4 Peptidase_M23 Mt_ATP-synt_D

Other DBs NCBI-GI: 13470543
NCBI-GeneID: 1224774
RhizoBase: mlr0277
UniProt: Q98N65

Position 197699..201895

AA seq 1398 aa
MNQEVMNLFNPQAPAQVFDSIRISLASPEKILSWSFGEIKKPETINYRTFKPERDGLFCA
RIFGPIKDYECLCGKYKRMKYKGVICEKCGVEVTLSRVRRERMGHIELAAPVAHIWFLKS
LPSRIGTLLDMTLKDIERVLYFENYIVTEPGLTALKEHQLLSEEEYMIAVDEYGEDSFTA
MIGAEAIHDLLAGMDLEKIAGDLRSELASTTSELKQKKYLKRLKVVENFMESGNRPEWMI
MKVVPVIPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLIELRAPGIIVRNEKRM
LQEAVDALFDNGRRGRVITGANKRPLKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVTG
PELKLHQCGLPKKMALELFKPFIYARLDAKGYSSTVKQAKKLVEKERPEVWDILDEVIRE
HPVLLNRAPTLHRLGIQAFEPILIEGKAIQLHPLVCTAFNADFDGDQMAVHVPLSLEAQL
EARVLMMSTNNILHPASGAPIIVPSQDMVLGLYYLSIVNQNEPGEGMVFADMGELQHALE
TKAVTLHAKIKGRFRTVDAEGKVVSKIHDTTPGRMIIGELLPKNVNVPYETANQEMTKKN
ISKMIDTVYRHCGQKETVIFCDRIMALGFAHACRAGISFGKDDMLIPDSKIKLVSDTEAL
AKEYEQQYNDGLITQGEKYNKVVDAWAKCSEKVADEMMARIKAVEFEDNGRQKPMNSIYM
MSHSGARGSPTQMRQLAGMRGLMAKPSGEIIETPIISNFKEGLTVLEYFNSTHGARKGLA
DTALKTANSGYLTRRLVDVAQDCIVNSVDCGTDKGLTMQPIVDAGQVVASVGQRVLGRTA
LDDINHPVTGDLLVKAGTLMDERDVEQIEKAGVQSVRIRSALTCEVRVGVCAVCYGRDLA
RGTPVNQGEAVGVIAAQSIGEPGTQLTMRTFHMGGTAQVVDSSFLEASYEGKVEIRNRNV
VRNSDGQQMVMGRNMAVLILDEAGKERATHRVTYGSRIFVDDGDKVKRGQRIAEWDPYTR
PILTEIEGRVAFEDLVDGISVQETADESTGITKREVIDWRSTPRGNDLKPAIVVQDAKGK
VGKLSKGGDARFLLSVEAILSVEPGAQVRPGDVLARIPMESAKTKDITGGLPRVAELFEA
RRPKDHAIIAEIDGTIRFGRDYKNKRRIIIEPHDSTLEPVEYLIPKGKPFHLQDGDVIEK
GDYILDGNPAPHDILAIKGVEALASYLVNEIQEVYRLQGVSINDKHIEVIVRQMLQKVEI
TTQGDSTYIPGDHVDVIELEEVNERLIEDGKKPAEGQPVLLGITKASLQTPSFISAASFQ
ETTRVLTEAAVAGKTDMLQGLKENVIVGRLIPAGTGGTMSQIRRIATSRDELIIDERRKA
SGVEVAEPMLADMTTAAQ

NT seq 4197 nt +upstreamnt +downstreamnt
atgaaccaagaggtcatgaatctcttcaatccgcaggcgcctgcgcaggtgttcgattcc
atccggatctcactggccagccctgagaagattctgtcctggtcgttcggcgagatcaag
aagccggagaccatcaactaccgcaccttcaagccggagcgtgacggtctgttctgcgcg
cgcatttttggcccgatcaaggactatgagtgcctgtgcggcaagtacaagcgcatgaag
tacaagggcgtcatctgcgagaagtgcggcgtcgaagtcacgctgtcgcgcgtccgtcgc
gagcgcatgggccatatcgagctcgctgcgcccgtcgcccatatctggttcctgaagtcg
ctgccctcgcgcatcggcacgctgctcgacatgacgctgaaggacatcgagcgcgtcctt
tacttcgagaactacatcgtcaccgaacctggcctcaccgcgctgaaggagcaccagctg
ctcagcgaggaagagtacatgatcgccgtcgacgagtatggcgaggattcgttcaccgcc
atgattggcgcggaggccattcatgaccttctggccggtatggatctggagaagatcgcc
ggcgacctgcgttcggaactggcttcgaccacgtccgagctgaagcagaagaagtatctg
aagcggctcaaggtcgtcgagaacttcatggaatccggcaaccgtccggaatggatgatc
atgaaggtggtcccggtgatcccgccggacctgcgcccgctcgtcccgttggacggcggc
cgtttcgccacgtccgacctgaacgatctctatcgccgcgtcatcaaccgcaacaaccgc
ttgaagcggctgatcgagctgcgcgcgcctggcatcatcgtgcgcaatgaaaagcgcatg
ctgcaggaagccgtcgacgcactgttcgacaacggccgtcgcggccgcgtcatcaccggc
gccaacaagcgtccgctgaagtcgctgtccgacatgctgaagggcaagcagggcaggttc
cgtcagaacctgctcggcaagcgcgtcgactattccggccgctcggtcatcgtcaccggt
ccggagctcaagctgcaccagtgcggcctgccgaagaagatggcgctcgaactgttcaag
cccttcatctacgcccgtctcgacgccaagggttactcctcgaccgtcaagcaggccaag
aagctggtcgagaaggagcgtccggaagtctgggatattctcgacgaggtcatccgcgag
cacccggttctgctcaaccgcgcgccgacgctgcatcgcctcggcatccaggcgttcgag
ccgatcctgatcgaaggcaaggcgatccagctgcacccgctggtctgcacggccttcaac
gccgacttcgacggcgaccagatggcggtccacgtgccgctgtccctggaagcgcagctt
gaagcccgcgtgctgatgatgtcgaccaacaacatcctgcacccggcttccggcgcgccg
atcatcgtgccgtcgcaggacatggttctgggtctctactatctctcgatcgtcaaccag
aacgagccgggcgagggcatggtgtttgccgacatgggcgaactccagcacgcgctcgag
accaaggcggtgacgctgcacgccaagatcaagggccgcttccgcaccgtcgacgccgaa
ggcaaggtcgtgtcgaagatccacgacaccacgcctggccgcatgatcatcggcgagctt
ctgccgaagaacgtcaatgtgccttacgagaccgccaaccaggagatgaccaagaagaac
atctccaagatgatcgacaccgtctaccgccattgcggtcagaaggagacggtcattttc
tgcgaccgcatcatggcgctcggcttcgctcacgcctgccgtgccggcatttcgttcggc
aaggacgacatgctgatcccggacagcaagatcaagctggtctccgacaccgaggctttg
gccaaggaatacgagcagcagtacaatgacggcctgatcacgcagggcgagaagtacaac
aaggtcgtcgacgcctgggccaagtgctcggaaaaggtcgccgacgagatgatggcccgc
atcaaggcggtcgagttcgaggacaatggccgtcagaagccgatgaactcgatctacatg
atgtcgcactccggtgcgcgtggctcgcccacccagatgcgtcagcttgccggcatgcgc
ggcctgatggcgaagccctcgggtgaaatcattgagacgccgatcatctcgaacttcaag
gaaggcctgaccgtgctcgagtacttcaactcgacccacggcgcccgcaagggtctggcc
gacaccgccttgaagacggcgaactcgggttacctcactcgccgtctggtcgacgtggcg
caggactgcatcgtcaactccgtggattgcggcaccgacaagggcctcaccatgcagccg
atcgtcgatgccggtcaggttgtcgcttcggtcggccagcgcgtgctgggccgcaccgcg
ctcgacgacatcaaccatccggtgaccggcgatctgctggtcaaggccggaacgctgatg
gacgagcgtgacgtggagcagatcgaaaaggccggcgtccagtcggtccgcatccgctcg
gcactgacctgcgaggtcagggtcggcgtgtgcgcggtctgctacggacgcgatctggcg
cgcggcaccccggtcaaccagggtgaagcggtcggcgtcatcgcggcgcagtcgatcggc
gagccgggcacccagctcaccatgcgtaccttccacatgggcggtaccgcgcaggtggtg
gatagctcgttccttgaagcctcctatgagggcaaggtcgagatccgcaaccgcaacgtg
gtgcgcaactcggacggccagcagatggtcatgggccgcaacatggcggtgctgatcctc
gacgaagccggcaaggagcgcgccacgcaccgtgtcacctatggttcgcgtatcttcgtg
gacgatggcgacaaggtgaagcgcggccagcgtatcgccgagtgggatccctacacccgc
ccgatcctcaccgaaatcgagggcagggtggcgttcgaggatctggtcgacggcatttcc
gtccaggaaacggccgacgagtcgaccggcatcaccaagcgtgaggtcatcgactggcgt
tcgacgccgcgcggcaacgatctgaagccggcgatcgtcgttcaggacgccaagggcaag
gtcggcaagctgtcgaagggtggcgatgcccgcttcctgctctcggtcgaggccattctc
tcggtcgagccgggtgcgcaggttcgtcccggcgacgtgctggcgcgtatcccgatggaa
agcgccaagaccaaggacatcaccggcggtctgccgcgtgttgccgaactgttcgaggca
cgtcgtccgaaggatcacgccatcatcgccgagatcgatggcacgatccgcttcggccgc
gactacaagaacaagcgccgcatcatcatcgagccgcatgactcgacgctcgagccggtc
gaatacctgatcccgaagggcaagccgttccatctccaggacggcgacgtcatcgagaag
ggcgactacatcctcgacggcaatccggcgccgcacgacatcctggcgatcaagggcgtg
gaggcacttgcttcctacctcgtcaacgagatccaggaagtctaccgcctgcagggcgtg
tcgatcaacgacaagcacatcgaggtgatcgttcgccagatgctgcagaaggtcgagatc
accacgcagggcgactcgacctacattccgggcgaccacgtcgacgtgatcgaactggaa
gaggtcaacgagcgcctgatcgaggacggcaagaagccggccgaaggtcagccggtgctg
ctcggcatcaccaaggcctcgctgcagacgccgtccttcatctcggccgcctccttccag
gagacgaccagggtgctgacggaagccgcggttgccggcaagaccgacatgctgcagggc
ttgaaggaaaacgtcatcgtcggccggctgatcccggccggtacgggcggcacgatgagc
cagatccggcgcatcgccacctcgcgtgacgaattgatcatcgacgagcgccgcaaggcc
tccggtgtggaagtcgccgagccgatgctggccgatatgacaaccgccgcgcagtaa

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (2)   
   RHIZOBASE-MLO (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (7)   
   Pfam (7)   
All databases (22)

DBGET integrated database retrieval system