KEGG T00043: mlr9524

Mesorhizobium loti: mlr9524

Entry

mlr9524 CDS T00043

Definition

DNA ligase-like protein

Orthology

K01971

DNA ligase (ATP) [EC:6.5.1.1]

Organism

mlo Mesorhizobium loti

Pathway

mlo03410	Base excision repair
mlo03420	Nucleotide excision repair
mlo03430	Mismatch repair
mlo03450	Non-homologous end-joining

Class

Genetic Information Processing; Replication and repair; Base excision repair [PATH:mlo03410]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:mlo03420]
Genetic Information Processing; Replication and repair; Mismatch repair [PATH:mlo03430]
Genetic Information Processing; Replication and repair; Non-homologous end-joining [PATH:mlo03450]

SSDB

Motif

Pfam:

DNA_ligase_A_M DNA_ligase_A_C mRNA_cap_enzyme Cas_Cas2CT1978

Other DBs

NCBI-GI:

NCBI-GeneID:

RhizoBase:

UniProt:

Position

pMLb:18701..19558

AA seq 285 aa
MRLKFVAPLMPTLVEKPPEGDAWIHEVKFDGYRSQLIIDEDGTRIYTRNGHDWTAKYSDL
VQEAKSLGAESAIIDGEIIVLNEAGLSDFGELRKAITHRQHDLYFVAFDLLHLNGFDLRD
MALKDRRAGLYAIIPPGLRIQFSDALPGDAKAIFELVDKAGLEGMVSKRKDSKYRSGNST
AWLKIKAYTVDEYELLGVEREAGKPAFALMADRKTGRYVGSAFINSSRAIRERLWKRVQE
HAGSPPKGMKRPGTQWVKPGLIGRVKHLRGEEDLRHASLQDFREE

NT seq 858 nt +upstreamnt +downstreamnt
atgcgtttgaagttcgtagcccccctaatgccgacccttgttgagaagcctcccgagggc
gacgcctggattcacgaggtcaagttcgacggctaccgatcgcagttgatcatcgatgag
gacgggacgcgcatctacacgcgcaatggtcacgactggacagccaaatattccgacttg
gtgcaggaggcgaagagcctcggcgccgaaagtgccatcatcgacggcgagatcatcgtt
ctgaacgaagccggcctgtccgacttcggcgaactccgcaaggccataacccaccggcag
cacgacctctatttcgtggcattcgatctgttgcacctcaacggattcgatcttcgcgat
atggcgctcaaagaccgcagggctgggctctacgcgataattccgcctggccttcgtatc
caattcagcgacgcgctgcccggcgatgccaaggcgatcttcgaactggtcgataaggcc
gggcttgaaggcatggtctcgaagcgcaaagacagtaagtatcgaagcggcaactcgacg
gcctggctcaagatcaaggcatacaccgtcgacgaatatgaactgctcggggtcgagcgt
gaggcgggcaagccggctttcgccctgatggccgatcgcaagaccggccgctatgtcggc
tcggctttcatcaactccagccgcgccatccgtgagcggctgtggaaacgtgtccaagag
cacgcagggtcgcctccgaaggggatgaagcggccggggacgcaatgggtcaagccgggc
ctgattggccgtgtgaagcacctacggggcgaggaagacctccgccacgcctcgctgcag
gattttcgtgaagaatga

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
   RHIZOBASE-MLO (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (17)   

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