KEGG   Melampsora larici-populina: MELLADRAFT_35186
Entry
MELLADRAFT_35186  CDS       T03138                                 
Name
(RefSeq) hypothetical protein
  KO
K12622  U6 snRNA-associated Sm-like protein LSm3
Organism
mlr  Melampsora larici-populina
Pathway
mlr03018  RNA degradation
mlr03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:mlr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    MELLADRAFT_35186
  09123 Folding, sorting and degradation
   03018 RNA degradation
    MELLADRAFT_35186
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mlr03019]
    MELLADRAFT_35186
   03041 Spliceosome [BR:mlr03041]
    MELLADRAFT_35186
Messenger RNA biogenesis [BR:mlr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     MELLADRAFT_35186
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     MELLADRAFT_35186
Spliceosome [BR:mlr03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    MELLADRAFT_35186
 Complex C
  U2 snRNP components
    MELLADRAFT_35186
SSDB
Motif
Pfam: LSM TIG_SUH
Other DBs
NCBI-GeneID: 18927445
NCBI-ProteinID: XP_007408659
JGI: Mellp1_35186
UniProt: F4RHW0
Position
Unknown
AA seq 95 aa
FDLIRLSLSERVLIKLRGDREVTGTLHAYDGHMNMVLSDVTESITIVEVPESPNQEPTIR
IVKRNCEMLFVRGDGVVLVIDFFAQLSSVQRSFQF
NT seq 288 nt   +upstreamnt  +downstreamnt
tttgatcttattcgattatcattatcagaaagagttttaatcaaactaagaggtgatcga
gaggtaacaggaactttacacgcttacgatggtcatatgaatatggtactttcagatgtc
accgaaagtattacgattgtagaagtacctgaaagtccaaatcaagaacctacaatacgt
attgttaaaaggaattgtgaaatgttgtttgtaagaggtgatggtgtagttttggtaatt
gattttttcgctcaattgagttcagttcaacgatcatttcaattctaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (16)   

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