KEGG   Melampsora larici-populina: MELLADRAFT_38453
Entry
MELLADRAFT_38453  CDS       T03138                                 
Name
(RefSeq) hypothetical protein
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
mlr  Melampsora larici-populina
Pathway
mlr03082  ATP-dependent chromatin remodeling
mlr03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:mlr00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    MELLADRAFT_38453
   03083 Polycomb repressive complex
    MELLADRAFT_38453
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:mlr03036]
    MELLADRAFT_38453
Enzymes [BR:mlr01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     MELLADRAFT_38453
Chromosome and associated proteins [BR:mlr03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     MELLADRAFT_38453
   HDAC complexes
    Sin3A-HDAC complex
     MELLADRAFT_38453
    BRAF-HDAC complex
     MELLADRAFT_38453
    REST complex
     MELLADRAFT_38453
    SHIP complex
     MELLADRAFT_38453
    MiDAC complex
     MELLADRAFT_38453
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     MELLADRAFT_38453
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    MELLADRAFT_38453
  Chromatin remodeling factors
   NuRD complex
    MELLADRAFT_38453
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 18927720
NCBI-ProteinID: XP_007414050
JGI: Mellp1_38453
UniProt: F4RYB5
Position
Unknown
AA seq 293 aa
MKKSQKCDFSEKRVLYVDIDVHHGDGVEEAFYTTDRVMTCSFHKYGEFFPGTGELRDIGS
GKGKRYAVNFPLRDGITDEAYKNIFEPVIMKIMETYQPSAIVLQCGGDSLAGDRLGSFNV
SLKGHANCVQFIKSLGLPLLLLGGGGYTIRNVSRTWAFETGLAAGQELCREIPMNEYYEY
FGPTYHLDVPASNMEDMNVNRYLEKVKVQIFENLRHTIPVPSLEMQPMPRLPHDDMEVDE
DLDDPNERKPQRLLDALVQGDDEFSASEDEGEGGRKNVQTYKTQKNWAEREGR
NT seq 882 nt   +upstreamnt  +downstreamnt
atgaagaaatctcaaaaatgcgacttttcagaaaaacgagtcttatacgtagacattgat
gttcatcacggagacggtgttgaagaagctttctataccacagatcgagtaatgacctgc
agttttcataagtatggtgaatttttccctggtacaggtgaattaagagatattggtagt
ggtaaaggaaaacgttatgctgttaattttcctttaagagatggaattactgatgaagct
tataaaaatatcttcgaacctgtgattatgaagatcatggaaacttatcaaccttcagcc
atcgttttacaatgtggaggagactccctggcaggcgatcggttaggaagttttaatgtc
tctctaaaaggacatgcaaactgtgttcagttcatcaaatcattagggcttccgttactt
ttactcggtggtggtggatatactatccgaaatgtgtcaaggacttgggcctttgagact
ggattggctgctggtcaagaactgtgtcgagaaattcccatgaatgaatattatgaatat
ttcggtccgacttatcatctagatgttcctgcctcaaatatggaagatatgaatgttaat
agatatcttgaaaaagtcaaggttcaaatttttgagaatttaagacatactatacctgta
ccatcacttgaaatgcaaccaatgcctcgattacctcatgatgatatggaagttgatgag
gacttagatgatcccaatgaaaggaaaccacagcggttattggatgccttggtacaaggt
gatgatgaattttctgccagtgaggatgaaggagaaggtggtagaaagaatgttcaaaca
tataaaacccaaaaaaattgggccgagagagaaggcagatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   RefGene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (18)   

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