KEGG   Methanosarcina lacustris: MSLAZ_0641
Entry
MSLAZ_0641        CDS       T03822                                 
Name
(GenBank) Archaeal transcription factor E
  KO
K03136  transcription initiation factor TFIIE subunit alpha
Organism
mls  Methanosarcina lacustris
Pathway
mls03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:mls00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    MSLAZ_0641
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mls03021]
    MSLAZ_0641
Transcription machinery [BR:mls03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIE
     MSLAZ_0641
 Prokaryotic type
  Archaeal type
    TFE
     MSLAZ_0641
SSDB
Motif
Pfam: TFIIE_alpha RepL HVO_2753_ZBP TF_Zn_Ribbon
Other DBs
NCBI-ProteinID: AKB73902
UniProt: A0A0E3S436
Position
complement(782575..783030)
AA seq 151 aa
MSLVGEDGLKMIGDMPEGEITDEEIATKTGVLLNTVRRTLFILYENKFAIVVRERDSNSG
WLTYLWHLDFSGIEHQLMREKKKLLRNLKTRLEFEDNNVFYTCPQGCVRLLFDEATETEF
LCPMCGEDLAYYDNSLFVGVLKKRVDALNNI
NT seq 456 nt   +upstreamnt  +downstreamnt
atgagccttgtaggggaagacgggcttaaaatgataggagatatgcccgaaggcgagatc
acggatgaagaaattgcaacaaagactggagttctgttgaatacggtgagaagaactcta
ttcatactttatgagaataaatttgcaatcgttgtaagagagagagattcaaacagcgga
tggttgacatatctctggcatctggacttttccggcatagagcaccagcttatgagggaa
aagaaaaaactgctccgcaacctgaagactcgcctggaatttgaagacaacaatgttttc
tatacgtgccctcagggctgtgttcgccttctttttgacgaagcaactgaaacagaattt
ctctgtcccatgtgcggagaagacctggcctattacgacaactccctttttgtgggagtc
ctgaaaaagcgcgtggatgccttgaataatatataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (12)   

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