KEGG   Methanosarcina lacustris: MSLAZ_2041
Entry
MSLAZ_2041        CDS       T03822                                 
Name
(GenBank) Cell division protein FtsH
  KO
K13525  transitional endoplasmic reticulum ATPase
Organism
mls  Methanosarcina lacustris
Brite
KEGG Orthology (KO) [BR:mls00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mls03019]
    MSLAZ_2041
   03009 Ribosome biogenesis [BR:mls03009]
    MSLAZ_2041
   04131 Membrane trafficking [BR:mls04131]
    MSLAZ_2041
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:mls04147]
    MSLAZ_2041
Messenger RNA biogenesis [BR:mls03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Ran-mediated transport factors
     MSLAZ_2041
Ribosome biogenesis [BR:mls03009]
 Eukaryotic type
  Pre-60S particles
   Ribosome quality control proteins
    MSLAZ_2041
Membrane trafficking [BR:mls04131]
 SNARE
  SNARE associated proteins
   Others
    MSLAZ_2041
 Autophagy
  Aggrephagy
   Other aggrephagy associated proteins
    MSLAZ_2041
Exosome [BR:mls04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   MSLAZ_2041
SSDB
Motif
Pfam: AAA AAA_lid_3 CDC48_N AAA_16 RuvB_N AAA_2 AAA_5 TIP49 AAA_22 AAA_14 AAA_33 CDC48_2 nSTAND3 RNA_helicase IstB_IS21 AAA_18 Parvo_NS1 Mg_chelatase Sigma54_activat AAA_28 AAA_24 NACHT AAA_7 ABC_tran Vps4_C NB-ARC Zeta_toxin AAA_17 PhoH TsaE ATPase AAA_3 AAA_11 bpMoxR SLFN-g3_helicase ResIII Sigma54_activ_2 AAA_30 KAP_NTPase AAA_25
Other DBs
NCBI-ProteinID: AKB75302
UniProt: A0A0E3S7C4
Position
2654604..2656898
AA seq 764 aa
MTEGDKSIIKLKVAEADQRDVGKGIIRIDEIFREKLGLKPFDVVEIRGEKLTSALIGRPY
PSDAGLDIVRMDGLIRTNAKTSIGEYVEIRKAEWKEAKHATLAPVTRGLQIYAPSETLSA
VFMNRTVSKGDFISTTSLRKSKERDTYSKGLMFDDFFQDFFGQGFGPSFGLGEIKLQVVS
TFPSGIVKITDMTEIELLPEAVEIPPEQTIPTVMYEDLGGLKDAITKVREMIELPLKHPE
LFDRLGIDAPKGVLLHGPPGTGKTMLAKAVANESDAYFISINGPEIMSKYYGESEKAIRD
IFDDAEKNAPAIIFLDEIDSIAPKRAEVTGEVERRVVAQLLSLMDGLKSRKNVIVIGATN
RPEALDLALRRPGRFDREIELRVPDTEGRLEIFQIHTRGMPLTEDVNLRDLGQITYGFVG
ADIAALCREAAMSALRRILPKLNLKEPQIPKELLDTLQVTRADFEEAMKEVQPSAIREIL
IEIPNVSWNDVGGLEDVKCLLKEAVEWPLKNPESYRDIGVEAPKGVLLYGPPGTGKTLLA
KAIAHESDANFITAKGSDLLSKWYGESEKRIAEVFMRARQVAPSIVFLDELDSLAPIRGI
SAGEPQVTARILNQLLSELDGLEELRGVVVIGATNRPDIIDPALIRPGRFDELILVPIPD
KGARREILKVHTKKMALAEGVDIEELVDLTDQYTGADLAAICKKAGRYALREELHAKNVK
QKHFLKAIAETGPSVTPDTMKYYKAIKGELRTKKSKEIENPSYI
NT seq 2295 nt   +upstreamnt  +downstreamnt
ttgactgaaggggataaatcgattataaaacttaaggttgcagaagctgatcaacgggat
gtaggaaaaggaatcatccgaattgacgaaatattcagagagaaactgggcctgaaacct
tttgatgttgtcgagatcagaggtgaaaaattaacttctgcccttataggtcgtccttat
cccagtgacgccgggcttgatattgtccgcatggacgggcttatccgtaccaatgcaaag
acaagcataggggaatatgtggaaattcggaaagctgaatggaaagaagcaaaacatgcg
actctggctcccgttacaaggggcttgcagatctacgctcccagtgagacgctcagtgcg
gtcttcatgaaccgtacggtttccaaaggggactttatctccaccaccagcttaaggaag
tccaaagagagagacacttatagcaaggggctcatgttcgatgactttttccaggacttt
ttcgggcagggttttggtccctccttcgggcttggggaaatcaaactgcaggttgtttcc
acctttccatcggggatcgtaaagatcacggacatgaccgaaatcgaactcctccccgaa
gccgtggaaattccgccggaacagactatccctactgttatgtacgaagacctgggcggg
ctcaaggatgccattacaaaagtaagggaaatgatagaactccctctgaaacaccctgaa
ctttttgaccgacttgggattgacgcccctaaaggggtgctgcttcacggccctccaggg
acaggcaagaccatgcttgcaaaggcggttgcaaatgagtctgatgcctatttcatttcc
atcaacggcccggaaataatgtccaaatactacggggaatctgaaaaagcgatccgtgat
atcttcgatgatgccgaaaagaacgcacctgctattatctttctagacgagatcgattcc
attgccccaaaaagagcggaggtcacaggggaagttgaaagaagagtggttgcccagctc
ctttccctgatggacggcttaaaaagccgcaagaacgttatcgtgatcggtgcgacaaac
cgccccgaagccctggaccttgcacttcgccgcccgggcaggtttgacagggaaatcgaa
ctccgggtccctgacaccgaaggcaggcttgagatttttcagatccatacaaggggaatg
ccccttaccgaggacgtgaacctcagggaccttggccagattacctatgggtttgtgggg
gctgacattgcggcgctctgccgggaagctgccatgagtgctcttcggcgtatcctccca
aagctcaacctgaaagaaccccagatcccaaaagaactcctggataccctgcaggtaaca
agagcagacttcgaagaggccatgaaagaagtccagccttcagccattcgggaaatcctt
attgagatcccaaatgtcagctggaatgatgtgggtggcctggaagatgtaaaatgcctc
ttaaaagaagccgtggaatggccgcttaaaaaccccgagtcttaccgggacataggagta
gaagctccaaaaggcgttctcctctacggcccccccggtactggaaagactcttcttgca
aaagccattgcccatgaatccgatgccaatttcatcacagccaaaggaagcgacctcctc
tccaagtggtacggggagtccgaaaagaggattgccgaggtcttcatgcgagcaaggcag
gttgctccttccattgtatttctggacgaacttgactctcttgcccccatccgcgggatc
tccgcaggggaaccacaggttacagcccggatccttaatcagctcctttccgaactggac
gggcttgaagagcttcggggtgtggtggtgattggtgcaaccaaccgtcctgacatcata
gaccctgccctgatccgtccagggcgctttgatgagcttatccttgtgcctattccggat
aaaggggcccggagagaaatcctcaaggtccacacaaagaagatggctcttgcagagggt
gtggatattgaagaacttgttgacctgactgaccagtacacaggtgcagatctcgcagcc
atatgcaaaaaggcaggaaggtatgccctgcgcgaagaactccatgcaaaaaacgtcaaa
caaaaacatttccttaaagcgattgcagagacagggccttcagttactccggacaccatg
aaatattataaagctattaaaggtgaactgaggaccaagaagtccaaagaaatagaaaac
ccatcttatatctaa

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (40)   
   Pfam (40)   
All databases (50)   

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