KEGG   Methanosarcina lacustris: MSLAZ_2836
Entry
MSLAZ_2836        CDS       T03822                                 
Name
(GenBank) TATA-box binding protein
  KO
K03120  transcription initiation factor TFIID TATA-box-binding protein
Organism
mls  Methanosarcina lacustris
Pathway
mls03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:mls00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    MSLAZ_2836
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:mls03000]
    MSLAZ_2836
   03021 Transcription machinery [BR:mls03021]
    MSLAZ_2836
Transcription factors [BR:mls03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   TATA-binding proteins
    MSLAZ_2836
Transcription machinery [BR:mls03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     MSLAZ_2836
  RNA polymerase III system
    TFIIIB
     MSLAZ_2836
  RNA polymerase I system
    SL1/TIF-1B
     MSLAZ_2836
SSDB
Motif
Pfam: TBP DUF3378
Other DBs
NCBI-ProteinID: AKB76097
UniProt: A0A0E3S943
Position
complement(3645650..3646201)
AA seq 183 aa
MSESSIKIENVVASTKLAEAFDLILIESEFEGAEYNKQKFPGLVYRVLDPKAAFLVFTSG
KVVCTGAKNVKDVHTVIGNMAKKLNGIGIPTIENPQITVQNIVASADLHTILNLNAIAIG
LGLENIEYEPEQFPGLVYRIDVPKVVVLIFSSGKLVVTGGKSPEDCERGVEVVRQQLDNM
GLL
NT seq 552 nt   +upstreamnt  +downstreamnt
atgagcgaatctagcattaaaattgaaaacgtggtcgcatccaccaaactcgctgaagcg
tttgatttaattttgatcgaatccgagttcgaaggcgccgagtacaacaagcagaagttt
ccggggctcgtctacagggttttggaccctaaagcagctttcctggtctttacttctgga
aaggttgtttgcacaggagcaaagaacgttaaagacgtgcacacggttattggcaatatg
gcaaaaaagctgaatggtatagggatcccaacaatcgaaaaccctcagattactgtccag
aatatagttgcctcagcagacctgcacactatccttaacctcaatgcaattgcaatcggg
cttgggcttgagaatatcgaatacgaacccgagcagttcccgggtcttgtgtacaggatc
gatgtacccaaggtagttgtcctcatcttcagttccggaaaactggtagttacaggtggg
aaatcccctgaagactgcgagaggggtgtagaagtagtccgtcagcagctcgacaacatg
gggcttttataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (11)   

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