KEGG   Methanosarcina mazei Go1: MM_0183
Entry
MM_0183           CDS       T00082                                 
Name
(GenBank) DNA topoisomerase III
  KO
K03168  DNA topoisomerase I [EC:5.6.2.1]
Organism
mma  Methanosarcina mazei Go1
Brite
KEGG Orthology (KO) [BR:mma00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mma03032]
    MM_0183
   03400 DNA repair and recombination proteins [BR:mma03400]
    MM_0183
Enzymes [BR:mma01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     MM_0183
DNA replication proteins [BR:mma03032]
 Prokaryotic type
  DNA Topoisomerases
   MM_0183
DNA repair and recombination proteins [BR:mma03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      MM_0183
SSDB
Motif
Pfam: Topoisom_bac zf-C4_Topoisom Toprim Toprim_2 OEP Auto_anti-p27 ABC_tran_CTD
Other DBs
NCBI-ProteinID: AAM29879
UniProt: Q8Q0F3
Position
254024..256522
AA seq 832 aa
MTVVAFAEKNKAAAQIASILGEGEVDKISVEGLPAYEFKWKGEEWLVMGLSGHIMNYDFP
EKYNKWSEVDPGTLLGVDPEKFVTRKEYEAAIKNLAKRADKIILACDYDREGENIGFEAK
TLAEEVTDVPVARARFSALSPKEVRKAFENPVDPDHNLAMAAEARQILDLKMGAAFTRFV
TLSVREKARTKDVLSIGPCQTPTCGFVYEREKAIRAFEAKDFWKITAVFAAKGGEFEGTH
RAGNIHDKEKAAEIFKRLKGAKEGLVVKKTVKEAKTSPPNPLNTTEFLKRASKFLGISPE
VALETAEQLYLAGFTSYPRTETNKYADDFDFKSLVFDFARQKEYKPFAESILSAPIVPKN
GEKDAHDHPPIHPIRAAARGEVSSAVNIPQAAEVYDLIARHFLANLMPAAVFEKTHLHLQ
VKEEPFDSSGTVLKEPGWLEVYPFENKKDKLLPFVEEKERVDVKKLSNTKSKTSPPKKLT
EAELLTLMDRHGIGTKATAPTHIETNKKRGYFENKGKTISILDTGFTLMEGLSLSVPILV
KPDIRSKIEALIQEVEDGKKEFEAALADGTVLIKEMYAQLEANKKELTSNIAGTIKDEAA
LEDKKNYIGTCKACGHVLRIIQTDSGRFVGCTGYPDCRNSFSLPKTGALTVLRSKECKKE
GAAVLKVGNKYNWAVGIGPCFKCEFEKECYPPETVGPCPECDGSMFLISFKDNRFLGCTK
RCGYTHSVPKTGKLTLLDKTCETCGWKLFRLKEEVEGNESLEEDICINRRCTEGIKYWKK
VGPRSGARAQGKISADSGAELGARSTARNKERTTARRVSKTVSVADSRKDRK
NT seq 2499 nt   +upstreamnt  +downstreamnt
atgacagttgtcgcatttgcagaaaaaaacaaagcagcagcccagatcgccagcatcctt
ggcgaaggggaagtggataaaatatcagtggaagggctgcctgcctacgagtttaaatgg
aaaggagaagagtggcttgtgatggggctttccggccacatcatgaactacgactttcca
gaaaaatataacaaatggagtgaagttgaccccgggacactgcttggagttgatccggaa
aaatttgtgaccaggaaggagtatgaagctgcaataaaaaacctggcaaaaagggcagac
aaaattatccttgcatgcgactatgacagggaaggggaaaatatagggtttgaagcaaaa
acccttgccgaagaggtcactgatgtccctgttgcaagggcacgtttttcagccctttcc
ccaaaagaagtaaggaaagcctttgaaaaccctgtagatcctgaccacaaccttgctatg
gctgccgaagccaggcagattcttgacctgaagatgggggctgcatttacacgttttgtt
acgctctcggtcagggaaaaagcaaggacaaaagacgtcctttcaatagggccctgccag
actcctacctgcgggtttgtttacgaaagggaaaaggctatccgggcttttgaggcaaag
gacttctggaagattactgcggtttttgctgcaaaaggaggggaattcgaaggcacccac
agggcaggaaacatccatgacaaagaaaaggcagctgaaatcttcaagaggctgaaaggg
gcaaaagaaggactcgttgtaaagaagaccgtaaaagaagcaaaaaccagccctccaaat
ccacttaacaccacagagttcctgaagcgggcttcaaagttcctggggatcagccccgaa
gttgcactcgaaaccgcagaacagctctaccttgcagggtttacgagctacccgaggaca
gagaccaataaatatgcagatgactttgacttcaagtccctggtctttgatttcgcaagg
cagaaagagtataagccatttgcagaatcaatcctctctgccccgatagttccaaagaat
ggagaaaaagacgcacatgaccacccacctatccacccgatcagggcggctgcaagggga
gaggtcagttctgcagtaaatataccgcaggctgctgaagtttatgaccttattgcaagg
catttcctggcaaacctcatgcctgcagcagttttcgaaaaaacccacctccacctgcag
gttaaggaagagcctttcgactcctcggggaccgtgcttaaagaaccgggatggcttgag
gtttatccgtttgaaaataaaaaagataagcttctcccgtttgtagaggaaaaagagaga
gtagacgtaaaaaagctgagcaatacaaaatccaagaccagccctccgaaaaaactgaca
gaagccgaactcctgacccttatggacaggcacgggatagggacaaaagcaacagcccct
acacatatagaaacaaacaaaaagagggggtatttcgagaataaaggaaagacaatttca
atcttagatacaggttttacccttatggaagggctttccctgtccgtccctatccttgta
aaacctgatatccgctcaaagatagaagcccttatccaggaagttgaagacgggaaaaaa
gagttcgaagcggctcttgccgatggtacggtcctgattaaagagatgtatgcccagctt
gaagcaaacaaaaaagagcttacctcaaacattgcaggcacaataaaggatgaagccgcc
ctcgaagacaagaaaaattacatcgggacatgtaaggcttgcgggcacgttctcagaatc
atacaaacggattccgggcgttttgtgggctgcacaggctatcctgactgcagaaactcc
ttctctctacccaagaccggagcccttaccgtgctcaggagcaaggaatgtaaaaaagaa
ggggcagccgtcctgaaggtgggaaacaaatacaactgggctgttggtattggaccctgc
tttaaatgcgagtttgaaaaggagtgctatccccctgaaaccgtgggaccctgccctgaa
tgtgacggaagcatgttcctgatatctttcaaagacaaccgcttcctgggctgtacaaag
cgttgtggatatacccattccgttcctaaaaccggaaaactgaccctcctcgacaaaacc
tgtgagacctgcggctggaagctgttcaggctgaaagaagaggtagaaggaaacgaaagc
ctggaagaagatatctgcataaaccggcgctgcactgaaggaataaagtactggaaaaaa
gtgggacccagaagtggagcaagagcacagggcaagatttctgcagactctggagcagag
ctcggggcgagaagtacggcaagaaataaggaaaggacgacggctcgcagagtttcaaaa
actgtatcagtggcagacagcaggaaagaccggaagtga

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (17)   

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