KEGG T00082: MM

Methanosarcina mazei Go1: MM_1895

Entry

MM_1895 CDS T00082

Definition

ATP-dependent DNA ligase (EC:6.5.1.1)

Orthology

K10747

DNA ligase 1 [EC:6.5.1.1]

Organism

mma Methanosarcina mazei Go1

Pathway

mma03030	DNA replication
mma03410	Base excision repair
mma03420	Nucleotide excision repair
mma03430	Mismatch repair

Class

Genetic Information Processing; Replication and repair; DNA replication [PATH:mma03030]
Genetic Information Processing; Replication and repair; Base excision repair [PATH:mma03410]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:mma03420]
Genetic Information Processing; Replication and repair; Mismatch repair [PATH:mma03430]

SSDB

Motif

Pfam:

DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C DNA_ligase_OB_2

Other DBs

NCBI-GI:

21227997

NCBI-GeneID:

1480237

UniProt:

Q8PVR7

Position

complement(2252874..2254613)

AA seq 579 aa
MRFKELAELFEELEKTTSHREIVRKISEFFKNLRGDEVKDSAYLFLGSTGPAFENTTLGI
KDMLAIRAIAGAYGVTREDVRKRYARTGDLGDVAFELSKKRESSLTIEDVFQRLLQIRET
SGKGSQEEKTALFSDILQKATPEEGKYIVRLVLGRLRLGFGDQFLLEAFAIAFTGDKKHA
AKIKESYSVCTDIGELAKILAENGARATGFISIKPGRPVKSMLSQRVESFEELEKRVKGK
KAAEEKYDGERVQVHKTGEGIKAFSRRLEDITSQYPEIIEDVRKTVPANEIVLDGEIVAY
AELERNGNRIEEFYPFQNLMQRRRKYEIENYRKKCPVAVFFFDILYLNGEPLLKRPYPER
RALLEMNVVESGIIRLSKRIVTESVEEIEDFFNETIEKGLEGIVVKSMSSNSYYEAGKRS
WFWFKWKQEYSEGMRETFDLVVVGSYYGRGRRKGSFGALLCAVLNKEGQRFETLTKVGTG
FTEADAEEINRLLSDHIVSEIPKGVSIKKGMLPDIFIEPAVVIEVLGSEITNSPGHTAGE
GEEETGLALRFPRFLRIRHDKTPYDAMTVKEVRDLKDGT

NT seq 1740 nt +upstreamnt +downstreamnt
gtgagatttaaagagcttgcagagctttttgaggagcttgagaagaccacgtcccacagg
gaaatcgtaagaaagatttctgaattttttaagaatctcaggggggatgaagtaaaggac
agcgcgtatctttttcttggaagcaccgggcctgcctttgaaaacacaaccctcgggatc
aaggacatgcttgccatacgggccattgcaggagcttacggagttaccagagaagatgtc
agaaaaagatatgcaagaacaggagacctaggagatgtggcttttgagctcagcaaaaaa
agagaatcttccctgaccattgaggatgtttttcaaaggcttctgcagataagagaaacc
tcaggaaaaggcagtcaggaagaaaaaacagcccttttttcggacatcttacaaaaagcc
acacctgaagaaggtaaatatatagtgcgacttgtgctcggaaggttaagattggggttc
ggagaccagttcttgctcgaagctttcgcaatcgcatttacaggagacaaaaaacatgcc
gcaaaaataaaagaaagctatagcgtctgtacggatatcggggagctagcaaaaatcctt
gcagaaaacggagcaagggctacagggtttatctccataaaaccgggtaggccggtaaaa
tccatgctctcccagcgagtcgaaagttttgaagagcttgaaaaaagggttaagggaaaa
aaagctgctgaagagaaatatgatggagagagggtgcaggtacataaaaccggtgagggg
attaaagctttttcccgcaggcttgaggacataacttcccagtaccctgaaattatcgaa
gatgtcagaaaaaccgtccctgcaaatgaaatagtgcttgatggagaaatagttgcatac
gcagaactggaaagaaacggtaaccggatagaagagttttacccgtttcagaacctcatg
cagaggcgaagaaagtacgagattgaaaattacaggaagaaatgcccggtagcagtattc
ttttttgatatcctttaccttaacggagagccccttctaaagaggccctatcctgaaaga
agggctttgcttgagatgaacgttgttgagtcaggaataattcgtctgtcaaaaagaatc
gttacggaaagcgttgaggaaattgaggatttttttaatgaaaccatagaaaaggggctt
gaaggaatagtggtcaagtccatgagcagcaactcttattacgaagccgggaaaaggagc
tggttctggttcaaatggaaacaggagtattccgaggggatgagagagacctttgacctt
gtggttgtggggagttattacggaagagggaggagaaaagggtcatttggagctcttctc
tgtgcagtcctgaataaagagggacagcggtttgaaacgttgacaaaagtgggaactggt
tttacagaagcggatgcagaagagatcaacaggttgctttcagaccatatagtaagcgaa
attccaaagggcgtttctattaaaaaaggtatgcttcctgatatctttatagaacctgca
gtagttatcgaagtccttggctcggagatcacaaacagccccggacatacggcaggagaa
ggagaagaagaaacaggacttgcactgcgtttcccccggttcttacgaataaggcacgac
aaaactccatatgatgccatgacagttaaggaagtaagggacctgaaggacggaacttaa

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (16)   

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