KEGG   Methanosarcina mazei Go1: MM_2417
Entry
MM_2417           CDS       T00082                                 
Name
(GenBank) Type II DNA topoisomerase VI, subunit B
  KO
K03167  DNA topoisomerase VI subunit B [EC:5.6.2.2]
Organism
mma  Methanosarcina mazei Go1
Brite
KEGG Orthology (KO) [BR:mma00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mma03032]
    MM_2417
Enzymes [BR:mma01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     MM_2417
DNA replication proteins [BR:mma03032]
 Prokaryotic type
  DNA Topoisomerases
   MM_2417
SSDB
Motif
Pfam: Topo-VIb_trans Top6b_C HATPase_c HATPase_c_3 MptE-like NFACT_N PFU
Other DBs
NCBI-ProteinID: AAM32113
UniProt: Q8PUB8
Structure
Position
2877339..2879204
AA seq 621 aa
METPIAEELAKKQKSISVAEFFEKNRQILGFDSAPRSLITTVKEAVDNALDACEEAGILP
DILVQVERTGPDYVTVIIEDNGPGIVREQIPKVFAKLLYGSRFHALKQSRGQQGIGISAA
VLYAQMTAGRHTKILSKTSPTAPAHYYELMINTSTNEPDILVDEVRDWFRPHGTQIELEM
RAAYVKGRRQSIYEYLKATAIVNPHARITLIDPDGNEEVFERATDKMPEPAEEILPHPEG
IELGTLMKMLHYTERQKLAPFLRYSFCKIGLLTAEEICKAAGLDPEIDPHALGRHEARKL
IEAFEKVKIMAPPTDCLSPIGEDLIYRGLEKETTVDFIATSTRKPAVYSGNPFVVEVGMA
YGGNLPKEEKISIMRFANRVPLLYQQGGCVTTHAVEDIKWKQYGLNQPGGGIPVGPVILL
IHVASINVPFTSESKDAIADIPVIKEEIDLAIKEVARKLKHYLSKQSNLKKRREKEIIIT
KVLPKLAAKVAHVLEKDVPDINPVVAKIMGNLLVHRVIKNNGDGTVDVAIKVKNFGTSAY
SFRVHEMLPCKVSGAKPEPKVVTMGNDYDYVWDISASAGSSKVLSYKIESASEEELQKLP
QLIVEGIEEELVTGAKAFKGV
NT seq 1866 nt   +upstreamnt  +downstreamnt
atggaaacccccattgcagaagaactcgccaaaaaacaaaaatcgataagtgtagcagaa
ttttttgaaaagaacaggcagatcctgggttttgattctgcgcctcgaagccttataaca
accgtaaaagaagcagtggacaatgctctcgatgcctgtgaggaagcaggaattctgcct
gatatccttgtccaggtcgagaggacaggaccggactatgtaactgttattatcgaagac
aacggtccgggaattgtaagagagcagatccccaaagtctttgcaaaactgctctacggc
tcaaggttccatgccctcaaacagagcagggggcagcaggggataggaatctcggcagct
gtcctctatgcccagatgacagcaggcaggcacactaaaattctctcaaaaaccagcccg
actgctcctgcacattattatgagctcatgatcaacaccagcacaaatgaacctgatatc
cttgtagacgaggtcagggactggttccgcccgcatgggacgcagattgagcttgagatg
agggctgcatatgtaaaagggagaaggcagtccatttacgaataccttaaagcaactgca
attgtaaacccccatgccaggataactcttatcgaccctgatggcaacgaagaagttttt
gaaagggctacggataaaatgcctgagcctgcggaagaaatcctgccccatcctgaaggc
attgagctcggaaccctcatgaaaatgctccactacactgagcgccagaaacttgctccg
ttcctgcgttactctttttgtaaaatagggctgcttactgcggaggaaatctgtaaagcc
gcagggcttgacccggaaatcgaccctcatgcactgggccgccatgaggcaagaaagctg
atcgaggcttttgagaaggtaaagatcatggctcctccgacggactgtctttctcctatc
ggtgaagaccttatctatcgggggcttgagaaagagactactgttgatttcattgctaca
agcacaaggaaaccggctgtgtattcgggaaatccctttgtggtggaagtcgggatggct
tacgggggcaaccttccgaaagaagaaaaaataagcatcatgcgttttgcaaaccgtgtg
cctctactttaccagcagggtggctgtgtgaccacacatgctgtggaggacattaagtgg
aagcagtacggcttaaaccagccaggagggggaattcctgttggtcctgttatcctcctt
atccacgttgcttccattaacgtgccctttacttcggaatcaaaggacgcgattgcagat
attcctgtgattaaagaggaaatcgaccttgcaatcaaagaagttgcaaggaaactcaag
cactacctgagcaagcagagcaacctcaagaagcgccgggaaaaagagatcatcattaca
aaggttcttccgaaattagcagcaaaggttgcacatgttctggaaaaagacgtccctgac
ataaatcccgttgttgcaaagatcatgggaaacctgcttgtgcacagggtaattaaaaac
aacggagacgggactgtagatgtggcaattaaggtcaagaacttcgggacttctgcttat
tctttcagggtacacgaaatgctcccctgtaaagttagcggggcaaagccagagccaaag
gttgtgaccatgggcaatgattacgattatgtctgggacatctcagcgtctgcagggtct
tccaaagtactgagctataaaatagaatctgcaagcgaagaagaactccagaagcttcct
caattgattgtagaagggattgaagaagaactggtaaccggggcaaaagctttcaagggt
gtttga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
3D Structure (1)   
   PDB (1)   
Protein domain (7)   
   Pfam (7)   
All databases (18)   

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