KEGG T04774: MMARE11

Mycobacterium marinum E11: MMARE11_11990

Entry

MMARE11_11990     CDS       T04774

Name

(GenBank) pseudouridine synthase

K06177

tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]

Organism

mmae Mycobacterium marinum E11

Brite

KEGG Orthology (KO) [BR:mmae00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:mmae03009]
    MMARE11_11990
   03016 Transfer RNA biogenesis [BR:mmae03016]
    MMARE11_11990
Enzymes [BR:mmae01000]
5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.28  tRNA pseudouridine32 synthase
     MMARE11_11990
    5.4.99.29  23S rRNA pseudouridine746 synthase
     MMARE11_11990
Ribosome biogenesis [BR:mmae03009]
Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    MMARE11_11990
Transfer RNA biogenesis [BR:mmae03016]
Prokaryotic type
  tRNA modification factors
   Psudouridine synthases
    MMARE11_11990

SSDB

Motif

Pfam:

PseudoU_synth_2

Other DBs

NCBI-ProteinID:

CDM75347

Position

1444585..1445451

AA seq 288 aa
MKPAPLRVRDALGPARVRLHGGPVLAELSERFGAAARAKVLAGEVVDAAGAIVDTATVAE
PGSHVYLYRDLPEEVPVPFEMPVLHQDEDIVVADKPHFLATMPRGRHVAQTALVRLRCEL
GLPELSPAHRLDRLTAGVLLFTTRRELRGRYQTLFARGAVRKTYLARAAVDADLAFPRVI
RSRIVKRRGHLQAVCEPGEPNAETLVELISPEGLYRLTPRTGRTHQLRVHMASLGLPIFG
DPLYPNVIPESPHDLSDFSSPLSLLAQRIEFEDPLSGSRREFVSPREI

NT seq 867 nt +upstreamnt +downstreamnt
gtgaagcccgcaccgctgcgcgtccgcgacgccttggggccggcgcgggtacgactgcac
ggtgggccggtgctggccgagctgagcgaacggttcggcgcggccgcccgcgcaaaggtg
ctggccggcgaggtggtcgacgcggcaggcgccatcgtcgataccgcgacggtggcggag
cccggatcgcatgtgtacctctaccgtgatcttcccgaagaagtgccggtgcccttcgag
atgccggtgctccaccaggacgaggacatcgtggtcgccgacaagccgcactttctggcg
accatgccgcggggtcgccacgttgcgcaaaccgcgctggtgcggttgcgctgcgagctc
gggttgcccgagctgagtccggcgcaccggctcgatcggctgacggccggggtgttgctg
ttcaccacccggcgcgagttgcgcgggcgatatcagacgctgtttgcccggggtgcggta
cgcaagacctacctggcccgggccgcggtcgatgctgacctggcattcccgcgggtgatc
cgcagccgcatcgtcaagcggcggggccacttgcaggcggtctgcgagcccggtgagccc
aatgcggaaacgctggtagagctgatctcacccgaaggcctataccggttgaccccgcgg
accgggcgcactcaccagctgcgggtgcacatggcctcgcttggcctgccgatcttcggg
gatcccctgtaccccaacgtgatacccgagtcgccacacgaccttagcgacttcagctcg
ccgctgagcctgctggctcagcgcatcgagttcgaggatccgctgtccggctcgcgccgc
gagttcgtcagtccccgagaaatatga

All links

Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (1)   
   Pfam (1)   
All databases (11)   

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