KEGG T02167: MODMU

Modestobacter marinus: MODMU_2283

Entry

MODMU_2283 CDS T02167

Gene name

ligB

Definition

ATP-dependent DNA ligase (EC:6.5.1.1)

Orthology

K01971

DNA ligase (ATP) [EC:6.5.1.1]

Organism

mmar Modestobacter marinus

Pathway

mmar03410	Base excision repair
mmar03420	Nucleotide excision repair
mmar03430	Mismatch repair
mmar03450	Non-homologous end-joining

Class

Genetic Information Processing; Replication and repair; Base excision repair [PATH:mmar03410]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:mmar03420]
Genetic Information Processing; Replication and repair; Mismatch repair [PATH:mmar03430]
Genetic Information Processing; Replication and repair; Non-homologous end-joining [PATH:mmar03450]

SSDB

Motif

Pfam:

DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C

Other DBs

NCBI-GI:

389863962

NCBI-GeneID:

13011040

UniProt:

I4EWF2

Position

complement(2244935..2246467)

AA seq 510 aa
MLLADVLAVSAAVSATRSRTAKAQAIADLVRRAGDAEVEPVTAWLSGELRQGRLGLGWRT
LSRLTGEPAAEPSLTVGALDAALDELATTSGAGSAARRDALVGAVLAAATESEQQFLVRL
LTGELRQGALEGVVLDAVALAADVPAAAVRRAFMLSGRLPETAATALTGGVAALDAVQLQ
VGRPVRPMLASPGSSLDAALTDLGSEVTVEFKLDGARIQVHRDGDVVRVWTRTLREVTDG
VPELVDRIRALPCETAVLDGETLALDDDGRPRPFQDTMSRFGSDSADAGVLLSPFLFDVL
HLDGRDLLDEPLAVRLDALAGLLADDAHAALRMPGVRRPTAEQAAGVLDDALTAGHEGVV
VKALDAPYAAGRRGKAWQKVKPVHTLDLVVLGAEWGYGRRSGKLSNIHLGARDPDGGEPV
MVGKTFKGMTDELLDWQTATFPDLAAEQPPWGVLLRPELVVEIALDGAQRSPRYPGGVAL
RFARVLRYRPDKTAAEADTIDAVRALLAGG

NT seq 1533 nt +upstreamnt +downstreamnt
gtgctcctcgccgacgtcctcgccgtgtccgccgcggtcagcgccacccgctcccggacg
gcgaaggcgcaggccatcgccgacctggtccgccgggccggggacgcggaggtcgagccg
gtcaccgcgtggctgtccggtgagctccggcagggccggctcgggctgggctggcggacg
ctgtcccggctgaccggcgagccggcggcggagccctcgctgaccgtcggcgcgctcgac
gcggcactcgacgagctggcgaccacctccggggcggggtccgcggcccgccgggacgcg
ttggtcggcgcggtgctggcggcggcgaccgagtcggagcagcagttcctcgtccggctg
ctcaccggggagctgcggcagggcgcgctggagggcgtggtgctggacgcggtcgcgctg
gcggcggacgtgccggcggccgcggtacgccgggcgttcatgctctccggccggctgccg
gagaccgcggccaccgcgctgactggcggggtcgcggcgctggacgccgtgcagctgcag
gtcggccgtccggtgcggccgatgctggccagcccgggctcgtcgctggacgccgcgctc
accgacctgggcagcgaggtcaccgtcgagttcaagctggacggcgcccgcatccaggtg
caccgggacggcgacgtcgtccgggtgtggacgcggacgctgcgcgaggtgaccgacggg
gtgccggagctggtggaccgcatccgcgcgctgccctgcgagaccgccgtcctggacggc
gagacgctggcgctggacgacgacggccggccgcggccgttccaggacacgatgagccgg
ttcggcagcgactccgccgacgcgggtgtgctgctgtcaccgttcctcttcgacgtgctg
cacctggacggccgcgacctgctcgacgagccgctggccgtgcggctggacgcgctggcc
gggctgctggccgacgacgcgcacgcggcgctgcggatgcccggcgtgcggcggcccacc
gccgagcaggcggccggcgtgctggacgacgcgctcaccgccggccacgagggcgtcgtg
gtcaaggcgctggacgcgccgtacgcggccgggcggcggggcaaggcgtggcagaaggtc
aagccggtgcacaccctggacctggtcgtgctcggcgcggagtgggggtacggccggcgg
tcggggaagctgtcgaacatccacctgggcgcccgcgaccccgacggcggcgagccggtg
atggtcggcaagaccttcaaggggatgaccgacgagctgctggactggcagaccgcgacc
ttccccgacctggccgccgagcagccgccgtggggtgtgctgctgcggccggagctggtc
gtggagatcgcgctggacggcgcgcagcgcagcccgcgctaccccggcggcgtggcgctg
cggttcgcccgggtgctgcgctaccgcccggacaagaccgcggccgaggcggacacgatc
gacgcggtacgcgccctgctcgccggcggctga

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (15)   

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