KEGG   Modestobacter marinus: MODMU_5580
Entry
MODMU_5580        CDS       T02167                                 
Name
(GenBank) Polynucleotide adenylyltransferase/metal dependent phosphohydrolase
  KO
K00970  poly(A) polymerase [EC:2.7.7.19]
Organism
mmar  Modestobacter marinus
Pathway
mmar03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:mmar00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    MODMU_5580
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mmar03019]
    MODMU_5580
Enzymes [BR:mmar01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.19  polynucleotide adenylyltransferase
     MODMU_5580
Messenger RNA biogenesis [BR:mmar03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Others
     MODMU_5580
SSDB
Motif
Pfam: PolyA_pol PolyA_pol_RNAbd HD tRNA_NucTran2_2
Other DBs
NCBI-ProteinID: CCH90947
UniProt: I4F5N4
Position
complement(5556180..5557601)
AA seq 473 aa
MRDLVEVSPVLVELGRRFTAAGHQVHLVGGSVRDALLAAESAGAPVAPGDLDLTTDARPE
QTLAVLRGFASSTWNTGIAFGTVGAEVRGERVEITTFRADRYDRESRNPEVAWGTSLVDD
LARRDFTVNAMAVSLGPDRTVTDPFGGLGDLLARRLRTPGAAVESFADDPLRMLRAVRFV
AQLGLTPDDEVVAAMTELAPQLGRITAERVQHEFSRTLLNPAPRAALELFVGTGLADVVL
PELSALRMEIDEHHQHKDVYTHSLTVLDQAIALEVADPDAESPDLVLRLAALLHDIGKPA
TRRHEARGRVSFHHHEVVGAKLVRKRLTALKYPKDVVEAVSRLTFLHLRFHGYGDGQWTD
SAVRRYVTDAGDLLPRLHKLVRSDSTTRNRKRAAALSATYDSLVERIAELAAAEDLGRIR
PDLDGNRIMELLGISPGPDVGQAWRFLKELRLERGPLDPDEAEAELLTWWRSR
NT seq 1422 nt   +upstreamnt  +downstreamnt
gtgcgcgacctggtcgaggtctctcccgtgctggtcgagctcggccggcggttcaccgcc
gccggtcaccaggtccacctcgtcggtggctcggtgcgcgacgcgctgctcgccgcggag
tccgccggcgcgccggtggcccccggcgacctcgacctgaccaccgacgcccggcccgag
cagaccctcgcggtgctgcgcggcttcgccagttccacgtggaacaccgggatcgcgttc
ggcaccgtcggcgccgaggtgcgcggcgagcgggtggagatcaccaccttccgggccgac
cgctacgaccgcgagtcgcgcaaccccgaggtcgcctggggcacctccctggtcgacgac
ctcgcccgccgggacttcaccgtcaacgcgatggccgtctcgctcggccccgaccgcacc
gtcaccgaccccttcggtgggctcggtgacctgctcgcccggcggctgcgcaccccgggc
gcggcggtggagtccttcgccgacgacccgctgcggatgctgcgcgcggtccgcttcgtc
gcccagctcgggctcaccccggacgacgaggtggtcgccgcgatgaccgagctggccccg
cagctgggccggatcaccgccgagcgggtgcagcacgagttctcccgcacgctgctcaac
ccggcgccgcgggcggcgctggagctgttcgtgggcaccgggctggccgacgtcgtgctg
cccgagctgtccgcgctgcggatggagatcgacgagcaccaccagcacaaggacgtctac
acccactcgctgaccgtgctggaccaggcgatcgcgctcgaggtcgcggacccggacgcc
gagtcgccggacctcgtcctgcggctggccgcgctgctgcacgacatcggcaagccggcc
acccgccggcacgaggcccgcggccgggtgtccttccaccaccacgaggtggtcggcgcg
aagctggtgcgcaagcggctgaccgcgttgaagtaccccaaggacgtcgtcgaggcggtc
tcccggctgaccttcctgcacctgcggttccacggctacggcgacggccagtggaccgac
tccgccgtccggcgctacgtcaccgacgccggtgacctgctcccccggctgcacaagctg
gtccgttcggactcgaccacccgcaaccggaagcgggccgcggcgctgtcggcgacctac
gactcgctggtcgagcggatcgccgagctggcggcggccgaggacctcggccggatccgc
cccgacctcgacggcaaccggatcatggagctgctcggcatctcccccggccccgacgtc
ggccaggcctggcggttcctcaaggagctgcggctcgagcgcggcccgctggaccccgac
gaggccgaggccgagctcctcacctggtggcgctcgcgctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (8)   
   KEGG ORTHOLOGY (1)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (19)   

Download RDF
DBGET integrated database retrieval system