KEGG   Mycobacterium sp. MCS: Mmcs_2506
Entry
Mmcs_2506         CDS       T00367                                 
Name
(GenBank) ATP-dependent DNA helicase, RecQ family
  KO
K03654  ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
Organism
mmc  Mycobacterium sp. MCS
Pathway
mmc03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:mmc00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Mmcs_2506
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mmc03019]
    Mmcs_2506
   03400 DNA repair and recombination proteins [BR:mmc03400]
    Mmcs_2506
Enzymes [BR:mmc01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     Mmcs_2506
Messenger RNA biogenesis [BR:mmc03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     Mmcs_2506
DNA repair and recombination proteins [BR:mmc03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      Mmcs_2506
SSDB
Motif
Pfam: DEAD Helicase_C RecQ_Zn_bind ResIII AAA_30 PcrA_UvrD_tudor HEM4 DUF3553 E2F_TDP
Other DBs
NCBI-ProteinID: ABG08614
UniProt: A0A5Q5BJQ2
Position
2662747..2664378
AA seq 543 aa
MVAVGERAAELCRMARRVFGWDELHPEQLEAMMAVLAGRDVVAVLPTGSGKSAIYQVPAV
LLDGATVVVSPLIALQEDQIAGLADTRAPEAVAINSRQRASQTDDNWAAVHSHEAEYIFV
SPEQLANDAVVGRLAEAAVSLIVVDEAHCVSAWGHDFRPDYLRLADAFAQFGNGAPVVAL
TATASVVVRREIVERLGLRDPLMVVGNFDRPNLTLEVEQFVRDADKRAAVVDTVAGLEVP
GLVYTATRKDAARYADALGERGVRAAVYHAGLVAAERERVHESFREDAVDVVVATSAFGM
GIDKPNVRFVVHASVPDSLDSYYQQIGRAGRDGGDARVLLFYRAEDLGLARFFTTHRPDA
DLIEAVYRALDTDKPMRTKALRERLDAQGRRLTNAINLLESADAIRSTRKGFYSNGIPPR
VAVEAAIEVVEARERVDRSRVEMMRGYAESRHCRRQFLLTYFGQPLPGPCGNCDRCRDGE
GATDADAGGQPAIPVDTAVSHREWGDGVVIGGDTDRVTVLFDDYGYRTLAMAAVTGKNLL
TTR
NT seq 1632 nt   +upstreamnt  +downstreamnt
gtggttgcagtaggtgagcgggcggcggaactgtgccgcatggcccggcgggtgttcggc
tgggacgaactgcaccccgaacaactcgaggcgatgatggccgtcctcgccggccgcgac
gtggtggcggtgctgccgaccggttcgggtaagtccgcgatctatcaggttcccgcggtg
ctgctcgacggcgccaccgtggtcgtctcgccgttgatcgccctgcaggaggatcagatc
gccggcctggccgacacccgtgcccccgaggccgtcgcgatcaactcccggcagcgcgcg
tcccagaccgatgacaactgggccgcggtgcacagccacgaggctgagtacatcttcgtc
tcgccggagcagttggccaacgatgccgtcgtcggcaggctcgccgaggcggcggtgtcg
ctgatcgtcgtcgacgaagcgcactgcgtgtcggcgtgggggcatgacttccggccggat
tatctgcggttggccgacgcgttcgcccagttcggcaacggggcgccggtggtggcgctc
accgcgacggcgtcggtggtggtgcgccgcgagatcgtggaacggttggggctgcgggac
ccgctgatggtcgtcggcaacttcgaccggcccaacctgacgctcgaggtggagcagttc
gtgcgtgacgccgacaagcgcgccgcggtggtggacaccgtcgccgggctcgaggtaccg
gggctggtctacaccgccacccgcaaggacgccgcgcgctacgccgatgcgctgggtgag
cggggcgtccgcgcggcggtgtaccacgccggactggtcgccgccgaacgcgaacgcgtc
cacgagagtttccgtgaggacgccgtcgacgtggtggtggccacctcggcgttcgggatg
gggatcgacaaacccaacgtgcggttcgtcgtccacgcatcggtgcccgattcgctggac
tcgtactaccagcagatcggcagggccggacgcgacggcggcgacgcgcgcgtgctgctg
ttctaccgggccgaggatctggggctggcccgattcttcaccacccaccgtcccgacgcc
gacctcatcgaggccgtctaccgggcgctcgacaccgacaaacccatgcggaccaaggcg
ctgcgcgaacgcctcgacgcgcagggacgccggctgaccaacgcgatcaacctcctggaa
tcggccgacgcaatccgatcgacacgaaaagggttctactccaacgggatcccgcctcgc
gttgcggtggaggccgcgatcgaggtggtcgaggcgagggaacgcgtggaccgcagccgc
gtcgagatgatgcgcggctacgccgaatcgcggcactgccgtcggcagttcctgctcacc
tacttcggccagccgctgcccggaccgtgcggcaactgcgaccgctgccgcgacggtgag
ggtgccaccgacgcggacgccggcggacagcccgccatcccggtggacaccgccgtttcc
caccgggagtggggggacggcgtggtgatcgggggcgacaccgaccgtgtcaccgtgctg
ttcgacgactacggataccgcacgctggccatggcggccgtcaccgggaagaacctgctc
acgacgcggtga

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