KEGG   Mycobacterium sp. MCS: Mmcs_4939Help
Entry
Mmcs_4939         CDS       T00367                                 
Gene name
ligC
Definition
ATP-dependent DNA ligase (EC:6.5.1.1)
Orthology
K01971  
DNA ligase (ATP) [EC:6.5.1.1]
Organism
mmc  Mycobacterium sp. MCS
Pathway
Base excision repair
Nucleotide excision repair
Mismatch repair
Non-homologous end-joining
Class
Genetic Information Processing; Replication and repair; Base excision repair [PATH:mmc03410]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:mmc03420]
Genetic Information Processing; Replication and repair; Mismatch repair [PATH:mmc03430]
Genetic Information Processing; Replication and repair; Non-homologous end-joining [PATH:mmc03450]
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
JGI: 
UniProt: 
Position
5229412..5230473
Genome map
AA seq 353 aa AA seqDB search
MQLPVSPPIAPMLSKAVTDIPLGASYEPKWDGFRSIVFRDGDEVELGSRNERPMTRYFPE
LVEAARAELPARCVIDGEIVIATADGLDFEALQLRLHPAASRVRMLAEKTPASFIAFDLL
ALGDTDYTSRPFVERRAELERVLTGGHTFHVTPATVDVDTARRWFHEFEGAGLDGVIAKP
LDGPYLPDKRVMFKVKHQRTADCVVAGYRLHKSGDDAIGSLLLGLYTDDGELASVGVIGA
FPMARRRALFAELQPLVATFDEHPWNWAAHADPDVVRRYGGGSRWNAGKDLSFVPLRPER
VVEVRYDHMEGRRFRHTAQFNRWRPDRDPRSCTYAQLEQPVTFRLGDIVPGLG
NT seq 1062 nt NT seq  +upstreamnt  +downstreamnt
gtgcaacttcccgtttcacccccgattgcgccgatgctgtcgaaggcggtcacggacatc
ccgctcggcgcgtcctacgaacccaagtgggacgggttccggtcgatcgtgttccgcgat
ggcgacgaggtggaactcggcagccgcaacgagcggccgatgacccggtacttccccgaa
ctcgtcgaggcggcccgcgcggagcttccggcgcggtgtgtgatcgacggcgagatcgtc
atcgccaccgccgacggactggacttcgaggcgctgcagttgcggttgcatccggcggcg
tcgcgggtgcggatgctggccgagaagacgccggcgtcgttcatcgcgttcgacctgctt
gcgctgggcgacaccgactatacgtcgcggccgttcgtcgaacggcgggccgaacttgaa
cgcgtgctcaccggcggccacacattccacgtcacgccggccaccgtcgacgtcgacacg
gcacggcgctggttccacgaattcgagggcgccggcctcgacggggtgatcgccaaaccg
ctcgacggaccgtatctgccggacaagcgggtgatgttcaaggtcaaacaccagcgcacg
gccgactgcgtggtcgccgggtaccggctgcacaaatcgggcgacgacgccatcgggtcg
ctgctgctcggtctgtacaccgacgacggcgagctggcgtcggtgggcgtgatcggggcg
tttccgatggcgcggcggcgggccctgttcgccgagctgcagccgctggtggccaccttc
gacgagcatccgtggaactgggccgcccacgccgatcccgacgtggtgcgccgctacggg
ggcgggtcgcgctggaacgcgggcaaggatctgtcgttcgtgccgttgcggcccgaacgg
gtggtcgaggtgcggtacgaccacatggaggggcggcgattccgccacaccgcccagttc
aaccgctggcgtcccgaccgcgacccgcgctcgtgcacctacgcgcaactcgagcagccg
gtcaccttccgcctcggcgacatcgtgccggggctcggctga
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