KEGG   Marinomonas mediterranea: Marme_0517Help
Entry
Marme_0517        CDS       T01449                                 

Definition
Formamidopyrimidine-DNA glycosylase (EC:3.2.2.23)
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
mme  Marinomonas mediterranea
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:mme00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    Marme_0517
Enzymes [BR:mme01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     Marme_0517
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     Marme_0517
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
JGI: 
UniProt: 
Position
541438..542253
Genome map
AA seq 271 aa AA seqDB search
MPELPEVETTKRGIEPNIVNKTIQQVVIRQPKLRWPIPDAVNALSGQKVESVSRRGKYIG
VHTKAGTLIIHLGMSGSLYFVDAGTPPLFHDHVDIEFSDSPIVMRYTDPRRFGAMLWQPG
DWLEHELLKSLGPEPLTDAFHADYLYERAQGRKQAIKMFIMDSKVVVGVGNIYANEALFK
AGIHPKRAAGKISRARLEAFVASIKEVLSAAIEQGGTTLKDFVGGDGKPGYFKQELAVYG
RGGEKCISCSNELSEIRLGQRSTVYCNNCQT
NT seq 816 nt NT seq  +upstreamnt  +downstreamnt
gtgccagaacttcccgaagtcgaaaccacaaaacgtgggatcgagccaaatattgtaaat
aagaccatacaacaggttgtcattcgtcagcctaaacttcgttggccaattcctgatgcg
gtaaatgcattgtcaggtcaaaaggtagaaagcgtgtctagacgtgggaagtacattggt
gtccatactaaagcagggacattaatcattcacttaggtatgtctggtagtttgtatttt
gtcgatgcgggaacgccgccgctgtttcatgatcatgtcgatattgagttttcggattca
ccaattgtgatgcgttataccgacccacgtcgctttggcgcaatgctttggcaacctggc
gactggttggaacatgaattgcttaagagtctggggccagaacctctgactgatgcgttt
catgcggattacttgtatgaaagggcgcaaggacgaaagcaggccataaaaatgttcatt
atggacagtaaggtggtggttggtgtgggcaatatctatgcaaatgaagccttgttcaaa
gcgggtattcacccaaagagggcagcaggtaagattagtcgagcccgattggaagcgttt
gttgcatccataaaagaggtcttgtccgctgcaatagagcaaggtggtacaaccttaaaa
gactttgtgggtggtgatggaaaaccagggtatttcaaacaagaattggccgtttacggg
cgtggtggagagaagtgtataagctgctctaatgaactttcagaaatacgtttaggacag
cgaagtaccgtatattgcaataactgccagacatag

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