KEGG   Marinomonas mediterranea: Marme_3020
Entry
Marme_3020        CDS       T01449                                 
Name
(GenBank) pseudouridine synthase
  KO
K06177  tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
Organism
mme  Marinomonas mediterranea
Brite
KEGG Orthology (KO) [BR:mme00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:mme03009]
    Marme_3020
   03016 Transfer RNA biogenesis [BR:mme03016]
    Marme_3020
Enzymes [BR:mme01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.28  tRNA pseudouridine32 synthase
     Marme_3020
    5.4.99.29  23S rRNA pseudouridine746 synthase
     Marme_3020
Ribosome biogenesis [BR:mme03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    Marme_3020
Transfer RNA biogenesis [BR:mme03016]
 Prokaryotic type
  tRNA modification factors
   Psudouridine synthases
    Marme_3020
SSDB
Motif
Pfam: PseudoU_synth_2
Other DBs
NCBI-ProteinID: ADZ92241
UniProt: F2K1L1
Position
3314728..3315363
AA seq 211 aa
MERPPILDILYEDEWLLVLNKPENCLSVPGRGPEKLDSILHRAEQYCGEAYAVHRLDHAT
SGLILVAKSLECQKRMYKAFREKEVDKEYLAIVRGTPIGQCGSVRKPLRCDWPNRPRQMI
CTEWGKDAITQWKPIKQVGNNTLVSLSPITGRSHQLRVHMQSLGHSIVGDEFYDDLYTNQ
DERLLLHAYRIEFAHPFTSAWVKFIAPCVFL
NT seq 636 nt   +upstreamnt  +downstreamnt
gtggaacgccctcctattttagacattctttatgaagacgaatggctgctggtgctgaat
aagccagaaaactgcttatccgtaccaggtcgtggtccagaaaaactcgactcaatactg
catcgagcagagcagtattgtggtgaagcttacgccgtgcaccgccttgatcatgcaaca
tccggcttaattctggtagcgaaaagccttgaatgtcaaaaacggatgtacaaagcattt
cgagaaaaagaagtagacaaagagtatctcgcgattgttcgaggcacgcccattgggcag
tgtggctcggtacgtaagcctttacgctgcgactggcccaatcgaccacgacaaatgatt
tgcacggaatggggaaaagacgcgataacacaatggaagccaattaaacaagtcgggaac
aacacgctcgtgagtttaagtccgatcacaggtcgatctcatcaacttcgagtacatatg
cagagcctaggacactccattgtgggagacgagttttacgacgacttatatacgaatcaa
gatgagcgactacttttacatgcttaccgtatagagttcgctcatccctttacatccgct
tgggtgaagtttattgcgccctgtgtctttttatag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (12)   

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