KEGG   Martelella mediterranea: Mame_03656
Entry
Mame_03656        CDS       T04757                                 
Symbol
ruvB
Name
(GenBank) Holliday junction ATP-dependent DNA helicase RuvB
  KO
K03551  holliday junction DNA helicase RuvB [EC:5.6.2.4]
Organism
mmed  Martelella mediterranea
Pathway
mmed03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:mmed00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    Mame_03656 (ruvB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mmed03400]
    Mame_03656 (ruvB)
Enzymes [BR:mmed01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     Mame_03656 (ruvB)
DNA repair and recombination proteins [BR:mmed03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     Mame_03656 (ruvB)
    RecFOR pathway proteins
     Mame_03656 (ruvB)
SSDB
Motif
Pfam: RuvB_N AAA_lid_4 RuvB_C AAA AAA_5 TIP49 Mg_chelatase AAA_3 Rad17 AAA_14 AAA_22 nSTAND3 AAA_2 AAA_16 ResIII AAA_17 AAA_18 RNA_helicase TsaE AAA_28 AAA_33 NTPase_1 AAA_24 NB-ARC IstB_IS21 Sigma54_activ_2 DUF815 ABC_tran AAA_7 Cytidylate_kin NACHT AAA_19 PduV-EutP
Other DBs
NCBI-ProteinID: AQZ52961
UniProt: A0A1U9Z5K1
Position
3933586..3934626
AA seq 346 aa
MSEADRLISPDKRGEDLDAALRPQTLDDFTGQAEARANLKVFIEAAKRRSEALDHVLFVG
PPGLGKTTLAQIMAKELGVNFRSTSGPVIAKAGDLAALLTNLEERDVLFIDEIHRLNPAV
EEILYPAMEDFQLDLIIGEGPAARSVKIDLSKFTLVAATTRLGLLTTPLRDRFGIPVRLN
FYTVEELELIIRRGARLMGLGMSDDGAREIARRARGTPRIAGRLLRRVRDFAEVADATEV
SRAIADEALTRLEVDHMGLDQLDRRYLNMICQHFGGGPVGIETIAAGLSEPRDAIEDIIE
PYMIQQGLIQRTPRGRVMTATAWKHLGLTPPKDADLTQFRLFDEGE
NT seq 1041 nt   +upstreamnt  +downstreamnt
atgagtgaagccgaccgtctgatttcgccggacaagcgcggggaagacctcgatgcggcg
ctgaggccgcagacgctggacgatttcaccggccaggcggaggcgcgcgccaatctgaag
gtgttcatcgaggccgcgaaacggcgaagcgaagcgctggatcatgtgctgttcgtcggc
ccgccggggctcggcaagaccacgcttgcccagatcatggccaaggagctcggcgtcaat
ttccgctcgacctcgggcccggtgatcgccaaggccggcgatctggccgctcttctgacc
aatctcgaagagcgcgacgtgctgttcatcgacgaaatccaccggctcaaccctgcggtc
gaggaaatcctctatccggcgatggaggattttcagctcgacctgatcatcggcgagggc
ccggcggcgcgttcggtcaagatcgacctgtcgaagttcacgcttgtcgcggccaccacg
cgactcggcctgttgacgacgccgctgcgcgaccggttcggcattccggtccggctcaac
ttctacaccgtcgaggagctggaactgatcatccgacgcggcgcccggctgatggggctc
ggcatgagcgatgacggcgcgcgagagatcgcgcggcgcgcccgcggcacgccgcgcatc
gccggccggctgctgcgccgggtgcgcgatttcgccgaagtggcggacgcaaccgaggtc
agccgcgcgatcgccgacgaggcgctgacgcggcttgaggtcgaccatatggggctcgac
cagctcgaccggcgctatctcaacatgatctgccagcatttcggcggcgggcctgtgggg
atcgagacgatcgcggcggggctttccgagccgcgcgacgcgatcgaggatatcatcgag
ccctatatgatccagcagggcctgatccagcgcaccccgcgcggacgggtgatgacggca
accgcctggaagcatctcggcctcacgcccccgaaagatgccgacctcacccagttccgg
ctgttcgacgaaggcgagtga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (33)   
   Pfam (33)   
All databases (43)   

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