KEGG   Methanohalophilus mahii: Mmah_0795
Entry
Mmah_0795         CDS       T01211                                 
Name
(GenBank) ribosomal RNA-processing protein RRP4
  KO
K03679  exosome complex component RRP4
Organism
mmh  Methanohalophilus mahii
Pathway
mmh03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:mmh00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Mmah_0795
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mmh03019]
    Mmah_0795
Messenger RNA biogenesis [BR:mmh03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     Mmah_0795
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Core exosome
     Mmah_0795
SSDB
Motif
Pfam: KH_6 ECR1_N KH_1 RRP4_S1 KH_2 RRP40_S1
Other DBs
NCBI-ProteinID: ADE36318
UniProt: D5EAW7
Position
823061..823828
AA seq 255 aa
MKRKIVYPGQMLSENEKQSGIGTYVQDGKVYSLFYGVANDKNRVTVVPFSGKYIPSPKDY
VIGYVIEVTSSNWIFDIGSPYDGLLHVSEYPKRVDSSMMRKEIDIWDCAILRIKDVNTSM
KVELSMKDRGLRRLDEGRIIDVSTTKVPRIIGHNGSMVSMLKKESNCDIFIGQNGRIWLK
GKDEDMNRLTQAIEIIENKSHISGLTNHISAFLRYEESDEIEEKEKPVPFTSSKKDYTED
ACRKVDVLLSDEDEN
NT seq 768 nt   +upstreamnt  +downstreamnt
atgaaacgcaaaatcgtttatcccggtcagatgctttccgaaaatgaaaagcaatctgga
ataggtacatatgtgcaggacggcaaagtatattcactgttctacggggtagccaatgat
aagaatcgtgtaacagttgttcctttttcaggtaagtacataccgtccccgaaagattat
gtgataggttatgtaatagaagtaacttcatcaaactggatatttgacatcggctccccc
tatgacggacttcttcatgtatctgaatatcccaaaagagtggatagttcaatgatgcga
aaggaaatagatatctgggattgtgcgattttgcgtataaaagatgttaatacttccatg
aaagtggaactttcaatgaaggatcgaggtcttcgccgtctggatgaaggcaggattata
gatgtatccactacgaaggtcccacgtatcatcggtcataatggatcaatggtttcaatg
ctcaaaaaggaatccaattgtgacatcttcataggacaaaacggaaggatatggttaaag
ggtaaagatgaagatatgaacaggctgacacaggccatagagataatcgaaaataaatcc
cacatatcaggattaaccaaccatattagtgcttttttgcgttatgaagaatccgatgaa
attgaggaaaaggaaaaacctgtaccatttaccagtagtaagaaggactacacagaagac
gcttgccgaaaagtagatgtgctgcttagtgatgaagatgaaaattga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (18)   

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