KEGG   Mycobacterium tuberculosis variant microti: RN08_2394
Entry
RN08_2394         CDS       T04291                                 
Name
(GenBank) UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase
  KO
K01928  UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
Organism
mmic  Mycobacterium tuberculosis variant microti
Pathway
mmic00300  Lysine biosynthesis
mmic00550  Peptidoglycan biosynthesis
mmic01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:mmic00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    RN08_2394
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    RN08_2394
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:mmic01011]
    RN08_2394
Enzymes [BR:mmic01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.13  UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
     RN08_2394
Peptidoglycan biosynthesis and degradation proteins [BR:mmic01011]
 Precursor biosynthesis
  Amino acid ligase
   RN08_2394
SSDB
Motif
Pfam: Mur_ligase_M Mur_ligase_C Mur_ligase FUSC-like DUF1611
Other DBs
NCBI-ProteinID: AMC59821
Position
complement(2416248..2417801)
AA seq 517 aa
MEAAPTGLRPNAVVGVRLAALADQVGAALAEGPAQRAVTEDRTVTGVTLRAQDVSPGDLF
AALTGSTTHGARHVGDAIARGAVAVLTDPAGVAEIAGRAAVPVLVHPAPRGVLGGLAATV
YGHPSERLTVIGITGTSGKTTTTYLVEAGLRAAGRVAGLIGTIGIRVGGADLPSALTTPE
APTLQAMLAAMVERGVDTVVMEVSSHALALGRVDGTRFAVGAFTNLSRDHLDFHPSMADY
FEAKASLFDPDSALRARTAVVCIDDDAGRAMAARAADAITVSAADRPAHWRATDVAPTDA
GGQQFTAIDPAGVGHHIGIRLPGRYNVANCLVALAILDTVGVSPEQAVPGLREIRVPGRL
EQIDRGQGFLALVDYAHKPEALRSVLTTLAHPDRRLAVVFGAGGDRDPGKRAPMGRIAAQ
LADLVVVTDDNPRDEDPTAIRREILAGAAEVGGDAQVVEIADRRDAIRHAVAWARPGDVV
LIAGKGHETGQRGGGRVRPFDDRVELAAALEALERRA
NT seq 1554 nt   +upstreamnt  +downstreamnt
gtggaggctgcgcccactggcttgcgccccaacgccgtcgtgggcgttcggttggccgca
ctggccgatcaggtcggcgcggccctggccgagggtccagctcagcgtgccgtcaccgag
gaccggacggtcaccggggtcacgctgcgcgcccaggacgtgtcacccggtgacctgttc
gccgccctgaccggctcgaccacccacggggcccgccacgtcggcgacgcgatcgcacgc
ggcgccgtcgcggtgctcaccgaccccgccggggtcgccgagatcgccggacgagcggcc
gtgcccgtgttggtgcaccccgcaccccgcggcgtgctcggcggcttggccgccaccgtg
tacgggcatccgtccgagcggttgacggttatcgggatcaccggaacgtccggcaagacc
accaccacctatctggtcgaggccgggttacgggctgccggacgcgtcgccgggctgatc
ggcaccatcggcatccgcgtcggcggcgccgaccttcccagcgcgctgaccaccccggag
gcccccacgctgcaggcgatgctggcggcgatggtcgaacgcggggtggacaccgtggtc
atggaggtgtccagccacgcgctggcgctgggccgggtggacggcacccggttcgccgtc
ggcgccttcaccaatctctcccgtgaccacctggatttccaccccagcatggccgactac
ttcgaggccaaggcgtcattgttcgatccggactcggcactgcgcgcccgcaccgccgtg
gtgtgcatcgacgacgacgccgggcgcgcgatggcggcgcgggccgccgacgcgatcacc
gtcagcgccgccgaccggcccgcacactggcgcgccacggatgtggcgcccacggacgcg
ggcgggcaacaattcaccgccatcgaccccgccggcgtagggcatcacatcggaatccgg
ctaccgggccgctacaacgtcgccaattgcctggtcgccctggcgattctggacaccgtc
ggggtctccccggaacaggcggtgccgggcctgcgtgagatccgggtcccggggcggctc
gagcagatcgaccgcggccagggctttctcgcgctggtcgactacgcgcacaaaccggaa
gcgctgcggtcggtgctgaccaccttggcgcacccggaccgccggctggcggtggtgttc
ggcgccggcggcgatcgtgacccgggcaagcgggccccgatgggccggatagccgcgcag
ctggccgacttggtggtcgtcaccgacgacaacccgcgtgacgaagatcccacggcgatc
cgccgcgaaatcctggctggggcggccgaagtcggcggtgatgcccaggtcgtcgagatc
gcagaccggcgggacgcgatccggcacgcggtcgcctgggcgcgccccggcgacgtggtg
ctcatcgccggcaaaggccacgagaccgggcaacgcggcggcgggcgggtccgcccgttc
gacgaccgggtggagctggctgccgcgctagaggccctcgagcggcgcgcatga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (5)   
   Pfam (5)   
All databases (23)   

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