KEGG   Methanosarcina mazei S-6: MSMAS_2281
Entry
MSMAS_2281        CDS       T04532                                 
Name
(GenBank) DNA gyrase subunit B
  KO
K02470  DNA gyrase subunit B [EC:5.6.2.2]
Organism
mmj  Methanosarcina mazei S-6
Brite
KEGG Orthology (KO) [BR:mmj00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mmj03032]
    MSMAS_2281
   03400 DNA repair and recombination proteins [BR:mmj03400]
    MSMAS_2281
Enzymes [BR:mmj01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     MSMAS_2281
DNA replication proteins [BR:mmj03032]
 Prokaryotic type
  DNA Topoisomerases
   MSMAS_2281
DNA repair and recombination proteins [BR:mmj03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      MSMAS_2281
SSDB
Motif
Pfam: DNA_gyraseB DNA_gyraseB_C Toprim HATPase_c HATPase_c_3
Other DBs
NCBI-ProteinID: AKB65477
UniProt: A0A0E3RHN1
Position
complement(2858634..2860538)
AA seq 634 aa
MSDKQVYDASHIQVLEGLEAVRKRPSMYIGSTDGRGLHHLVYEVVDNSIDEALAGFCSEI
DVTINPNGSVTVIDNGRGIPIDPHPVHKKSALEVVMTILHAGGKFDKNTYKVSGGLHGVG
VSVVNALSEWTEVEVSRDGKKYFQRYIRGKPESDVREIGTSDTTGTKTTFKPDTKIFETT
DFQYDILLNRLRELAFLNRGLIINLKDLRSPEGQAETFNYSGGIIEFVEYLNKKKQPLHE
KPIYFERQRDDMVVEIAMQYTNGYTENVYSFANNINTHEGGTHIIGFKTALTRVANDYIK
ANKLSKEDEKLTGDDVREGLTAIISVKLMEPQFEGQTKTKLGNSEVKGIVDSLVTDGLAE
YFEENPKVANIILDKALLAQRAREAAKKARELTRRKSALEVSTLPGKLADCSNKNPAECE
IYIVEGDSAGGSAKQGRDRSFQAILPLRGKILNVEKSRLAKILKNNEVISLITAIGTGVS
EDFDLENARYHKIIIMTDADVDGAHIRTLLLTLFFRYMRHLIDAGYVYIAQPPLYKIKKG
KMDYYAYSDKELADKLKELGEKGVAIQRYKGLGEMNPGQLWETTMDPESRTLLQVTLEDA
IRADEIFRVLMGDEVEPRRNFIETHAKEVVDLDI
NT seq 1905 nt   +upstreamnt  +downstreamnt
atgagtgataaacaggtttatgacgcttcgcacatccaggttcttgaaggcctggaggct
gtccgaaaacgcccgagcatgtatatagggagcacagatgggcgcgggctccaccaccta
gtctatgaggttgtagacaacagtattgatgaagctcttgcaggcttctgttcagagatc
gatgtcacgatcaatcccaatggaagcgtgactgtaattgacaatggaaggggtatccct
atcgatccgcacccggtgcataagaaatcggcacttgaggtcgtgatgacgattttgcac
gcgggaggaaaatttgacaagaatacttacaaggtctccgggggcctgcacggggtgggg
gtctcggtagtaaatgccctttcggaatggaccgaagtggaagtaagcagagatggaaag
aagtacttccagcgttatatccgcggaaaacctgaatccgatgtccgggaaataggaact
tcggataccacaggcacaaaaaccactttcaaaccggacacaaaaatctttgagacaact
gacttccagtatgatatcctgttaaataggctcagagaacttgcttttctgaaccgcggc
cttataatcaatctgaaggatttaagaagccccgaaggtcaggcagagactttcaactat
agcggagggataattgagtttgtggaatatcttaataagaaaaaacagcccctccatgaa
aaaccgatctatttcgaaagacagagagatgatatggtagtggaaattgcaatgcagtac
acaaacggttacactgaaaacgtgtactcttttgcaaacaacattaacacccacgaaggc
gggacccatattatcggttttaagactgcccttacaagggtagccaacgattacataaag
gccaataagctctccaaggaagacgaaaagctgacaggagacgatgtaagggaaggtctg
actgcgattatcagtgtcaagctaatggagccccagtttgaagggcagaccaagacaaag
ctcggaaacagtgaggtcaaagggatagttgactcccttgtaactgacgggcttgcagag
tactttgaagaaaaccccaaagttgccaatattatccttgacaaagcccttcttgcccag
agagctagagaggctgcaaagaaggcaagggaacttacgcggagaaagagtgcgcttgag
gtcagcaccctgccgggaaaacttgcagactgttctaataagaaccctgcagaatgtgag
atctatattgttgaaggagactctgcaggcggttctgcaaagcagggcagagaccgaagc
ttccaggcaattctgcctctcaggggcaagatccttaatgtagaaaagtccaggcttgca
aagatcctgaaaaacaacgaggtcatttcacttattacagccatagggacaggagtaagt
gaagactttgatcttgaaaacgcacgctaccacaaaatcattattatgaccgatgccgat
gtggacggcgctcatatccgaacccttcttctgaccctgttcttccgttatatgaggcat
ctgatagatgcagggtacgtatacattgcccagccgcctctttacaagataaagaaagga
aaaatggattactatgcgtattcggataaagagctggcagataagttaaaagaactcggg
gagaaaggcgttgccatccagcgttacaaaggtcttggagaaatgaaccctgggcagctc
tgggaaaccaccatggaccctgagagccggacccttttgcaggttactctggaagatgca
atccgagctgacgaaatcttccgtgtacttatgggagatgaggtcgaacctcgcagaaac
ttcatcgaaacacatgcaaaagaggttgtggacctggatatctga

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (15)   

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