KEGG   Janthinobacterium sp. Marseille: mma_3575
Entry
mma_3575          CDS       T00561                                 
Symbol
pdhD2
Name
(GenBank) dihydrolipoamide dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
mms  Janthinobacterium sp. Marseille
Pathway
mms00010  Glycolysis / Gluconeogenesis
mms00020  Citrate cycle (TCA cycle)
mms00260  Glycine, serine and threonine metabolism
mms00280  Valine, leucine and isoleucine degradation
mms00310  Lysine degradation
mms00380  Tryptophan metabolism
mms00620  Pyruvate metabolism
mms00630  Glyoxylate and dicarboxylate metabolism
mms00640  Propanoate metabolism
mms00785  Lipoic acid metabolism
mms01100  Metabolic pathways
mms01110  Biosynthesis of secondary metabolites
mms01120  Microbial metabolism in diverse environments
mms01200  Carbon metabolism
mms01210  2-Oxocarboxylic acid metabolism
mms01240  Biosynthesis of cofactors
Module
mms_M00009  Citrate cycle (TCA cycle, Krebs cycle)
mms_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
mms_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
Brite
KEGG Orthology (KO) [BR:mms00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    mma_3575 (pdhD2)
   00020 Citrate cycle (TCA cycle)
    mma_3575 (pdhD2)
   00620 Pyruvate metabolism
    mma_3575 (pdhD2)
   00630 Glyoxylate and dicarboxylate metabolism
    mma_3575 (pdhD2)
   00640 Propanoate metabolism
    mma_3575 (pdhD2)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    mma_3575 (pdhD2)
   00280 Valine, leucine and isoleucine degradation
    mma_3575 (pdhD2)
   00310 Lysine degradation
    mma_3575 (pdhD2)
   00380 Tryptophan metabolism
    mma_3575 (pdhD2)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    mma_3575 (pdhD2)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:mms04147]
    mma_3575 (pdhD2)
Enzymes [BR:mms01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     mma_3575 (pdhD2)
Exosome [BR:mms04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   mma_3575 (pdhD2)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 Lys_Orn_oxgnase DAO GIDA FAD_binding_3 NAD_binding_8 Thi4 3HCDH_N FAD_binding_2 AlaDh_PNT_C ApbA HI0933_like NAD_Gly3P_dh_N 2-Hacid_dh_C Lycopene_cycl
Other DBs
NCBI-ProteinID: ABR88917
UniProt: A6T418
Position
complement(3974282..3975715)
AA seq 477 aa
MKTLKFDVAVIGAGSAGMSAYRAVKAHGKSAVLIEGGPYGTTCARVGCMPSKLLIAAAEA
AHAATEAPGFGVHPGSVRIDGKQVMQRVKSERDRFVGFVVESVESIAAAERLHGYARFVS
PGCLQVGEDTQVMAERVVIATGSTPQIPPELRGLGARVITSDDIFERDDLPESVAVVGAG
VIGLELGQALQRLGVRVALFGRSGRLAQLGDDAINQSAIESIGAELDLRLNTSIVSAKLV
GEQVEFVSRQQDGSERTEHFQYVLAATGRTPNVKNIGLENTGLHLNPQGIPLFDSLTMQC
GNSAIFIAGDADNDRPLLHEAADEGRIAGDNAVRFPEVVAGLRRSRLMVAFTDPQIAVVG
QTGRDLKPRQFEVGQVSFANQGRSRVMRQNRGLLKVYGERGTHRFLGAEMVGPRAEHIGH
LLAWACQSGMTVGQMLDMPFYHPVVEEGLRTALRELKENLLKEEDAIEHCTDCTPGT
NT seq 1434 nt   +upstreamnt  +downstreamnt
atgaaaacgcttaaattcgatgtcgcagtaatcggcgccggtagtgccggtatgtccgcc
tatcgtgccgtcaaggcacatggcaagagtgcggtcttgattgaaggcggcccctacggc
accacttgcgcacgcgtcggttgcatgccgagcaaattattgattgccgctgccgaagcg
gcgcatgcagcgactgaagcgcctggttttggcgtgcatcccggttctgtgcgcatagat
ggcaagcaagtcatgcaacgcgtgaaatccgagcgtgatcgtttcgtcggttttgtggtg
gaaagcgtggagtccatagctgcggctgagcgcttgcacggctatgcgcgttttgtttca
cctggctgtctgcaagtcggtgaggatacgcaagtgatggcggaacgcgtcgtgattgcg
accggttccaccccgcagatcccgccggaattgcgcgggctgggtgcgcgcgtgatcacc
agtgacgatatttttgagcgcgacgatttacctgaatcggtagcggtagttggtgccggc
gtcatcggactggaactggggcaagccttgcaacggctgggtgtgcgcgtggccttgttc
ggccgcagcggcaggctggcgcaattgggcgacgatgcgatcaatcaaagcgcgattgaa
agcatcggtgccgaactggatttgcgtttaaatacgagcattgtttcggccaaactggtc
ggcgagcaggtcgaattcgtttcgcgccagcaggatggcagtgaacgcaccgagcacttc
cagtatgtgttggcggcgaccggccgcacgccgaatgtgaagaatatcggactggaaaac
actggcctgcatttaaacccgcaaggcattccgctgtttgattccctgaccatgcagtgc
ggcaatagcgcgatctttattgcgggcgacgcggataatgaccggccgttgttgcatgag
gcggcggatgaagggcgcatcgccggtgataacgcagtgcgttttcctgaagttgttgcc
ggtttgcggcgtagccgtttgatggttgctttcaccgatccgcagattgcggtggtcggc
caaaccggcagggatctgaagccgcggcagttcgaagtcgggcaggtctcgtttgcgaac
cagggtcgcagccgggtcatgcggcaaaaccgcggcttgctgaaggtctacggcgagcgt
ggcacgcatcgcttcctcggtgcggaaatggtcgggccgcgtgccgagcatatcggacat
ttattggcgtgggcctgccagagcgggatgacggtcggacaaatgctggatatgccgttt
taccacccggtagtggaagaggggctgcggactgctttacgcgaattgaaagaaaacctg
ctgaaggaagaggatgcgatcgagcactgcaccgattgcacgccaggcacctga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (23)   
   KEGG PATHWAY (16)   
   KEGG MODULE (7)   
Chemical substance (27)   
   KEGG COMPOUND (27)   
Chemical reaction (11)   
   KEGG ENZYME (1)   
   KEGG REACTION (10)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (18)   
   Pfam (18)   
All databases (94)   

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