KEGG   Methylomonas methanica: Metme_1823
Entry
Metme_1823        CDS       T01511                                 
Name
(GenBank) Ribosomal protein S12 methylthiotransferase rimO
  KO
K14441  ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
Organism
mmt  Methylomonas methanica
Brite
KEGG Orthology (KO) [BR:mmt00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:mmt03009]
    Metme_1823
Enzymes [BR:mmt01000]
 2. Transferases
  2.8  Transferring sulfur-containing groups
   2.8.4  Transferring alkylthio groups
    2.8.4.4  [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
     Metme_1823
Ribosome biogenesis [BR:mmt03009]
 Prokaryotic type
  ribosomal protein modification factors
   Metme_1823
SSDB
Motif
Pfam: Radical_SAM TRAM_2 UPF0004 TRAM Amidohydro_2
Other DBs
NCBI-ProteinID: AEG00240
UniProt: G0A3E1
Position
1993507..1994817
AA seq 436 aa
MSNPRVGFISLGCPKALVDSEQILTRLRSEGYQVSPNYKDSDLVIVNTCGFIDAAVEESL
DSIGEALAENGRVIVTGCLGARQDEILARHPQVLKITGAHATDEVVSAVHEHLPPAHNPF
TDLLPPQGIKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIDEVMQEAERLADAG
VKELLIVSQDTSAYGLDLKYQHRRWRGQDLQTRFYDLAAALGELGIWVRMHYVYPYPHVD
QVVPLMAEGKILPYLDIPFQHANSRILKLMKRPAAAENNLERIKAWRNICPDLTIRSTFI
VGFPGETEQEFEELLQFLSEAQMDRVGCFAYSPVKGAVANELPDSLPEEVKQQRLARFMA
HQAAISAERLQRRVGRIETVLVDEVVEEGAVARSKSDAPEIDGQVFIDGATHLHVGDFVE
VEIEEADEYDLWGKLI
NT seq 1311 nt   +upstreamnt  +downstreamnt
atgagtaatccccgcgttggttttatcagtttgggctgcccaaaagccctggtcgatagc
gagcagattttgacgcgtctgcgtagcgaaggctatcaggtctcgcccaattacaaagat
tcggatttagtgatagtgaatacctgtggtttcatcgatgcggcagtggaagagtcgctg
gatagcataggcgaggccctggcggaaaacggccgggtgattgttaccggttgcctgggt
gcgcggcaggatgaaattctggccagacatccgcaggtattgaaaattaccggcgcgcat
gccaccgacgaagtggtcagtgcggtacacgagcatctgccgccggcacacaatccgttt
acggatttattgccgccgcagggcatcaagctgacgccgcgacactatgcctatctaaaa
atctcagaaggttgcaatcaccgatgcactttttgcatcattccgtccatgcgcggggac
ttggtcagccggcccatcgacgaggtcatgcaggaagccgagcgactggccgatgcaggc
gtcaaggagctattgatcgtttcgcaagataccagcgcttatggcttggatttgaaatat
cagcatcggcgttggcgcgggcaggatctgcaaacccgcttttacgatttggccgccgcc
ttaggcgagttgggcatatgggtgcggatgcattacgtttacccttacccgcacgtggat
caggtggtgccgttgatggcggagggtaaaatcttgccttacctggatattccgtttcag
catgccaatagccgtatcttaaagctgatgaagcggcccgcagcggcggaaaacaatctg
gagcgcatcaaggcctggcgcaatatttgtcccgatctgactattcgcagcacgttcatc
gttggatttcccggcgagaccgagcaggagtttgaagagttattacaatttttgagcgaa
gcgcaaatggaccgggtcggttgttttgcctattcgccagtgaaaggcgcggttgccaac
gagttgccggattcgctgccggaagaggttaaacaacagcgtttggcgcggtttatggcg
catcaggctgcaattagcgccgagcgcttacagcgcagggtggggcgaatcgaaaccgta
ttggtcgacgaggtggtcgaggagggcgccgttgcccgcagtaaaagcgatgcgccggaa
atcgacgggcaggttttcattgatggcgctactcatcttcacgtcggcgatttcgtcgaa
gtggaaatcgaagaagcggatgaatatgatttatggggcaaactgatttag

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Ontology (3)   
   KEGG BRITE (3)   
Chemical substance (9)   
   KEGG COMPOUND (9)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (11)   
   KEGG ORTHOLOGY (1)   
   RefGene (8)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (32)   

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