KEGG   Methylomonas methanica: Metme_3013Help
Entry
Metme_3013        CDS       T01511                                 

Definition
Formamidopyrimidine-DNA glycosylase (EC:3.2.2.23)
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
mmt  Methylomonas methanica
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:mmt00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    Metme_3013
Enzymes [BR:mmt01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     Metme_3013
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     Metme_3013
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
JGI: 
UniProt: 
Position
3345933..3346748
Genome map
AA seq 271 aa AA seqDB search
MPELPEVETSRRGITPHVLGKTFKDVIIRQPQLRWPVPEGLNSILPGLHLDKIERRGKYL
LLATKAGTLILHLGMSGNLRISDSGQPVLKHDHADFIFTDGTILRFNDQRRFGAILWTSE
SVEQHALLAALGPEPLSEAFNAEFLLKRCQNRRIPIKSLIMDSHIVVGVGNIYASESLFL
AGLHPTRPAEDIDLADCQRLCDAIKTVLLWAIEQGGTTLRDFVNAQGKPGYFQQSLSVYG
RAGQACSQCAEPIQQVKIGQRASYFCGNCQS
NT seq 816 nt NT seq  +upstreamnt  +downstreamnt
atgccggaactgcccgaagtcgaaaccagccggcgcggcattacgccgcacgtcctggga
aaaacctttaaagacgtcatcatccgccaaccgcaattgcgctggcctgtgccggaaggc
ttaaacagcatcctgccagggttacatctggataagatcgaacgacgcggcaaatatttg
ctgcttgccacaaaagccggcaccttaatactgcatctgggcatgtcgggtaatctgcgc
attagcgattcggggcaaccggttcttaaacacgatcacgcggatttcattttcaccgac
ggcaccatcctgcgctttaacgaccaacgccggttcggggctattttgtggacatcggaa
tccgtagagcagcatgccctattggccgccttgggacccgaaccgctttccgaagcattc
aatgccgagttcttgctgaagcgatgtcaaaatcgccggatacctattaaaagcctgatt
atggatagccacatcgtggtgggggtgggtaatatctatgccagcgaatccttgtttctg
gccggcctgcaccccacccggcccgcggaagatatcgacttagccgattgccaacgtcta
tgcgacgcgataaaaaccgtgttgctttgggcgatcgagcaaggcggcaccaccttgcgc
gactttgtcaacgcgcaaggcaaacccggttattttcaacaatcgctatcggtatacggc
cgtgccggccaagcgtgctcgcaatgcgccgaacccatccagcaagtcaaaatcggccag
cgcgccagctatttctgcggtaactgccaatcctga

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