KEGG T01002: 12845

Mus musculus (mouse): 12845

Entry

12845 CDS T01002

Gene name

Comp, TSP5

Definition

cartilage oligomeric matrix protein

Orthology

K04659

thrombospondin 2/3/4/5

Organism

mmu Mus musculus (mouse)

Pathway

mmu04145	Phagosome
mmu04151	PI3K-Akt signaling pathway
mmu04510	Focal adhesion
mmu04512	ECM-receptor interaction
mmu05144	Malaria

Class

Environmental Information Processing; Signal transduction; PI3K-Akt signaling pathway [PATH:mmu04151]
Environmental Information Processing; Signaling molecules and interaction; ECM-receptor interaction [PATH:mmu04512]
Cellular Processes; Transport and catabolism; Phagosome [PATH:mmu04145]
Cellular Processes; Cell communication; Focal adhesion [PATH:mmu04510]
Human Diseases; Infectious diseases; Malaria [PATH:mmu05144]

SSDB

Motif

Pfam:

TSP_C TSP_3 COMP EGF_CA cEGF EGF_3 hEGF EGF_MSP1_1

Other DBs

NCBI-GI:

NCBI-GeneID:

MGI:

Ensembl:

UniProt:

Structure

PDB:

1MZ9 3V2N 3V2P 3V2Q 3V2R

Position

8 B3.3; 8 34.15 cM

AA seq 755 aa
MGPTACVLVLALAILRATGQGQIPLGGDLAPQMLRELQETNAALQDVRELLRQQVKEITF
LKNTVMECDACGMQPARTPGLSVRPVPLCAPGSCFPGVVCSETATGARCGPCPPGYTGNG
SHCTDVNECNAHPCFPRVRCINTSPGFHCEACPPGFSGPTHEGVGLTFAKSNKQVCTDIN
ECETGQHNCVPNSVCVNTRGSFQCGPCQPGFVGDQTSGCQRRGQHFCPDGSPSPCHEKAN
CVLERDGSRSCVCAVGWAGNGLLCGRDTDLDGFPDEKLRCSERQCRKDNCVTVPNSGQED
VDRDGIGDACDPDADGDGVPNEQDNCPLVRNPDQRNSDSDKWGDACDNCRSKKNDDQKDT
DLDGRGDACDDDIDGDRIRNVADNCPRVPNFDQSDSDGDGVGDACDNCPQKDNPDQRDVD
HDFVGDACDSDQDQDGDGHQDSRDNCPTVPNSAQQDSDHDGKGDACDDDDDNDGVPDSRD
NCRLVPNPGQEDNDRDGVGDACQGDFDADKVIDKIDVCPENAEVTLTDFRAFQTVVLDPE
GDAQIDPNWVVLNQGMEIVQTMNSDPGLAVGYTAFNGVDFEGTFHVNTATDDDYAGFIFG
YQDSSSFYVVMWKQMEQTYWQANPFRAVAEPGIQLKAVKSSTGPGEQLRNALWHTGDTAS
QVRLLWKDPRNVGWKDKTSYRWFLQHRPQVGYIRVRFYEGPELVADSNVVLDTAMRGGRL
GVFCFSQENIIWANLRYRCNDTIPEDYESHRLQRV

NT seq 2268 nt +upstreamnt +downstreamnt
atgggccccactgcctgcgttctagtgctcgccctggctatcctgcgggcgacaggccag
ggccagatcccgctgggtggagacctggccccacagatgctgcgagaacttcaggagact
aatgcggcgctgcaagacgtgagagagctgttgcgacagcaggtcaaggagatcaccttc
ctgaagaatacggtgatggaatgtgatgcttgcggaatgcagcccgcacgcactccaggc
ctgagcgtgcggccagtgccgctctgcgcacccggctcctgcttccccggcgtagtctgc
tccgagacagctacgggcgcgcgctgcggcccctgccctcctggctacaccggcaacggc
tcgcactgcaccgacgttaatgagtgcaatgctcacccctgtttcccgcgggtgcggtgc
atcaataccagccctggctttcactgcgaagcctgtccccctgggttcagcggacccacc
cacgagggcgtgggactgaccttcgctaagtccaacaaacaagtttgcacggatattaat
gagtgtgagaccgggcagcacaattgcgttcccaactccgtgtgcgtcaacacccggggc
tccttccagtgcggcccctgccagcccggtttcgtgggcgaccagacgtcaggctgccag
cggcgtgggcagcacttctgccccgatgggtcacccagcccgtgccatgagaaagcaaac
tgcgtcctggagcgggatggctcgaggtcttgcgtgtgtgcagttggctgggccggcaac
gggctcctgtgcggccgcgacacggacctggacggttttcctgacgagaagcttcgctgc
tcagagcgccagtgtcgcaaggacaactgcgtgacggtgcccaattcggggcaggaggat
gtggaccgggacggcatcggagatgcttgtgacccggatgcggacggggatggagtccct
aacgagcaagacaattgcccgctggttcgaaacccagaccagcgtaactcggacagtgat
aagtggggagatgcctgcgacaactgccggtccaagaagaatgacgatcagaaagataca
gacctggatggccggggcgatgcctgcgacgacgacatagatggcgaccgaatacgaaat
gtagctgacaactgtccccgggtgcccaactttgaccagagtgacagtgatggtgatggt
gttggggatgcctgtgacaactgtccccagaaagataacccagaccagagggatgtggac
cacgactttgtgggtgatgcctgtgatagtgaccaagaccaggatggggatggtcaccag
gactcccgggacaactgccccacagtacccaacagtgcccagcaggactcagatcatgat
ggcaagggcgatgcctgtgatgacgatgatgacaatgacggagttcctgatagccgggac
aactgccgcttggtgcctaaccctggccaagaggacaatgaccgggatggcgtgggtgac
gcgtgtcagggtgacttcgatgctgacaaggttatagacaagatcgatgtgtgccccgag
aacgccgaggtcaccctcaccgacttcagggccttccagacggttgtgttggaccccgag
ggtgatgcgcagatcgatcccaactgggtggtgctcaatcagggaatggagatcgttcag
accatgaacagtgaccctggcctggctgtgggttacacagccttcaacggcgtggacttc
gagggcacattccatgtaaacaccgccactgatgatgactatgctggtttcatcttcggc
taccaagacagctccagtttctacgtagtcatgtggaaacagatggagcagacgtactgg
caggccaatcccttccgggctgtggctgagccagggattcagctcaaggctgtcaagtcc
tctacaggtcccggggaacagctccgaaacgcactgtggcacacgggggacacagcatcc
caggtgcggctgctgtggaaggatcctcgaaacgtgggctggaaggataaaacatcctac
cgctggttcctgcagcaccggcctcaagttggctacatcagggtgcggttctatgagggt
cctgagctagtagctgacagcaatgtggtgttggacacggccatgcgtggtggccgcctg
ggtgtcttctgcttctcccaagagaacatcatctgggctaacctgcgctaccgttgcaat
gatacaatccctgaggactacgagagtcaccggctgcagagagtctag

All links

Pathway (5)   
   KEGG PATHWAY (5)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (4)   
   UniGene (1)   
   ENSEMBL-MMU (1)   
   MGI-MMU (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (11)   
   RefSeq(nuc) (1)   
   GenBank (5)   
   EMBL (5)   
3D Structure (5)   
   PDB (5)   
Protein domain (8)   
   Pfam (8)   
All databases (42)   

Download RDF

DBGET integrated database retrieval system