KEGG T01002: 16881

Mus musculus (mouse): 16881

Entry

16881 CDS T01002

Gene name

Lig1, AL033288, LigI

Definition

ligase I, DNA, ATP-dependent (EC:6.5.1.1)

Orthology

K10747

DNA ligase 1 [EC:6.5.1.1]

Organism

mmu Mus musculus (mouse)

Pathway

mmu03030	DNA replication
mmu03410	Base excision repair
mmu03420	Nucleotide excision repair
mmu03430	Mismatch repair

Class

Genetic Information Processing; Replication and repair; DNA replication [PATH:mmu03030]
Genetic Information Processing; Replication and repair; Base excision repair [PATH:mmu03410]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:mmu03420]
Genetic Information Processing; Replication and repair; Mismatch repair [PATH:mmu03430]

SSDB

Motif

Pfam:

DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C mRNA_cap_enzyme DDR PucR DUF1682

Other DBs

NCBI-GI:

NCBI-GeneID:

MGI:

Ensembl:

UniProt:

Position

7 A1; 7 7.82 cM

AA seq 932 aa
MRKKEQERKGETSAANMQRSIMSFFQPTKEGKAKKPEKETPSSIREKEPPPKVALKERNQ
VVPESDSPVKRTGRKVAQVLSCEGEDEDEAPGTPKVQKPVSDSEQSSPPSPDTCPENSPV
FNCSSPMDISPSGFPKRRTARKQLPKRTIQDTLEEQNEDKTKTAKKRKKEEETPKESLAE
AEDVKQKEEKEGDQLIVPSEPTKSPESVTLTKTENIPVCKAGVKLKPQEEEQSKPPARGA
KTLSSFFTPRKPAVKTEVKQEESGTLRKEETKGTLDPANYNPSKNNYHPIEDACWKHGQK
VPFLAVARTFEKIEEVSARLKMVETLSNLLRSVVALSPPDLLPVLYLSLNRLGPPQQGLE
LGVGDGVLLKAVAQATGRQLESIRAEVAEKGDVGLVAENSRSTQRLMLPPPPLTISGVFT
KFCDIARLTGSASMAKKMDIIKGLFVACRHSEARYIARSLSGRLRLGLAEQSVLAALAQA
VSLTPPGQEFPTAVVDAGKGKTAEARKMWLEEQGMILKQTFCEVPDLDRIIPVLLEHGLE
RLPEHCKLSPGVPLKPMLAHPTRGVSEVLKRFEEVDFTCEYKYDGQRAQIHVLEGGEVKI
FSRNQEDNTGKYPDIISRIPKIKHPSVTSFILDTEAVAWDREKKQIQPFQVLTTRKRKEV
DASEIQVQVCLYAFDLIYLNGESLVRQPLSRRRQLLRENFVETEGEFVFTTSLDTKDTEQ
IAEFLEQSVKDSCEGLMVKTLDVDATYEIAKRSHNWLKLKKDYLDGVGDTLDLVVIGAYL
GRGKRAGRYGGFLLAAYDEESEELQAICKLGTGFSDEELEEHHQSLQALVLPTPRPYVRI
DGAVAPDHWLDPSIVWEVKCADLSLSPIYPAARGLVDKEKGISLRFPRFIRVRKDKQPEQ
ATTSNQVASLYRKQSQIQNQQSSDLDSDVEDY

NT seq 2799 nt +upstreamnt +downstreamnt
atgagaaaaaaagagcaagagaggaaaggagagacttctgctgccaacatgcagagaagt
attatgtcattttttcaacccacaaaagaaggtaaagcgaagaagccagagaaggagaca
cccagcagcatcagagagaaggaaccccctccaaaggtggcgctgaaggagaggaatcaa
gtggtgcccgagagtgattctccagtgaagaggacaggaaggaaggtagcccaggttctg
agctgtgaaggggaggacgaagatgaagcccctggcacccccaaagtccagaagcctgtg
tcagactctgaacagagctctcctcccagccctgacacatgtcctgagaacagtcctgtc
ttcaactgcagctcccccatggacatctccccatcaggattcccaaagcgtcgaactgcg
cggaagcagctccccaaacggacaattcaagacactcttgaggagcagaatgaggacaaa
accaaaacagctaagaaaaggaagaaagaagaagagaccccaaaagaaagcctcgcagag
gctgaagacgtaaaacagaaggaagaaaaggagggggaccagctcatagtcccctctgag
cccacaaagtcccctgagtcagtaaccctgacaaagacagagaacattccagtgtgtaag
gcaggagtgaaactgaagcctcaggaagaggaacagagcaaacctcctgctagaggtgcc
aagacactgagcagtttcttcacaccccgaaaaccagcagtgaaaactgaagtcaaacaa
gaagagtcaggcactctaaggaaggaagagaccaagggaaccctggatccagcaaattat
aatccttccaagaataactatcatcccattgaagatgcctgctggaaacatggccagaag
gtcccttttctcgccgtggcccggacatttgagaagattgaggaggtttctgctaggctc
aagatggtggagacattgagcaacctgctgcgctccgtggtggccctgtcccctccagac
ttgctccctgttctctatctcagcctcaaccgcctcgggccacctcagcagggactagag
ctgggtgttggtgatggtgtcctcctcaaggccgttgcccaggccacaggtcgtcagctg
gagtccatccgggctgaggtagctgagaagggggatgtggggctggtggccgagaacagc
cgcagcactcagagactcatgctgcctccacctccacttactatttctggagtcttcacc
aaattctgtgacattgcccggctcactggcagtgcttccatggccaagaagatggacatt
atcaagggcctttttgttgcctgccgccactcagaagccaggtacattgccaggtcccta
agcgggcggctgcgccttggcctagctgagcagtcggtactggctgctcttgcccaggct
gtgagcctcacaccccctggccaagaatttcccacggcggtggtggatgctgggaagggc
aagacagcagaggccagaaagatgtggttggaagaacaaggcatgatcttgaagcagacc
ttctgtgaggttcctgacctggatcgaatcatccctgtgctgctggaacatggcctggaa
cgtctcccagagcactgcaagctgagcccaggggtccctcttaaaccaatgctggctcat
cccactcggggtgtcagtgaggtcctaaaacgctttgaggaggtcgacttcacctgtgaa
tataaatacgatgggcagcgagcacagatacatgttctggaaggtggagaagtgaagatc
ttcagcaggaaccaggaagacaacacaggaaagtatcctgacattatcagccgcatcccc
aagattaaacacccctcagtcacatctttcattctggacactgaggctgtggcctgggac
cgggaaaagaagcagatccaaccattccaagtactcaccacgcgcaagcgcaaggaggtt
gatgcatcggagatacaggtgcaagtgtgtctgtatgcttttgacctcatctacctcaac
ggagagtccctggttcgccagcccctgtctcgacgccggcagctgctccgtgagaacttc
gtggagacagagggtgagtttgtcttcaccacctctttggacaccaaggacaccgagcag
attgctgagttcttggagcagtcagtgaaggactcctgtgagggcctgatggtgaagacc
ttggatgttgatgccacttatgagattgccaagaggtcacacaactggctcaagctgaag
aaggactaccttgacggtgtgggtgacactctggaccttgtggtgattggtgcctacctg
ggccgggggaagcgggctggccggtatggaggcttcctgttggctgcctacgatgaggag
agtgaagagcttcaggctatatgcaagctgggaactggattcagcgatgaggagctggag
gaacaccaccagagcctgcaggccctggtattgcctaccccacgcccctatgtgaggatt
gatggggcagtggccccagaccattggctggacccaagcattgtgtgggaggtgaagtgt
gctgatctttccctgtcccccatctaccctgctgcacggggcctggtggacaaagaaaaa
gggatctctcttcgttttcctcggttcattcgtgtccgtaaagacaagcagccagagcag
gccactaccagtaaccaggttgcctctttgtaccggaagcagagtcagattcagaaccaa
caaagctcagacttggactccgacgttgaagactattaa

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (16)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (9)   
   UniGene (2)   
   ENSEMBL-MMU (1)   
   MGI-MMU (1)   
   OC (1)   
Protein sequence (6)   
   UniProt (3)   
   RefSeq(pep) (3)   
DNA sequence (29)   
   RefSeq(nuc) (3)   
   GenBank (13)   
   EMBL (13)   
Protein domain (7)   
   Pfam (7)   
All databases (64)   

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