KEGG   Mus musculus (mouse): 20269Help
Entry
20269             CDS       T01002                                 

Gene name
Scn3a, Gm1000, Nav1.3
Definition
(RefSeq) sodium channel, voltage-gated, type III, alpha
  KO
K04836  
voltage-gated sodium channel type III alpha
Organism
mmu  Mus musculus (mouse)
Pathway
Taste transduction
Brite
KEGG Orthology (KO) [BR:mmu00001]
 Organismal Systems
  Sensory system
   04742 Taste transduction
    20269 (Scn3a)
Ion channels [BR:mmu04040]
 Voltage-gated cation channels
  Na+ channel, SCN alpha, NaV1.x
   20269 (Scn3a)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif Motif
Other DBs
NCBI-GeneID: 
NCBI-ProteinID: 
MGI: 
Ensembl: 
Vega: 
Position
2 C1.3; 2 38.55 cM
AA seq 1996 aa AA seqDB search
MAQALLVPPGPESFRLFTRESLAAIEKRAAEEKAKKPKKEQDIDDENKPKPNSDLEAGKN
LPFIYGDIPPEMVSEPLEDLDPYYVSKKTFVVLNKGKAIFRFSATSALYILTPLNPVRKI
AIKILVHSLFSMLIMCTILTNCVFMTLSNPPDWTKNVEYTFTGIYTFESLIKILARGFCL
EDFTFLRDPWNWLDFSVIVMAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGAL
IQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRNKCLQWPPSDSAFEINTTSYFNGTMD
SNGTFVNVTMSTFNWKDYIADDSHFYVLDGQKDPLLCGNGSDAGQCPEGYICVKAGRNPN
YGYTSFDTFSWAFLSLFRLMTQDYWENLYQLTLRAAGKTYMIFFVLVIFLGSFYLVNLIL
AVVAMAYEEQNQATLEEAEQKEAEFQQMLEQLKKQQEEAQAVAAASAASRDFSGIGGLGE
LLESSSEASKLSSKSAKEWRNRRKKRRQREHLEGNHRPEGDRFPKSESEDSVKRRSFLFS
LDGNPLSGDKKLCSPHQSLLSIRGSLFSPRRNSKTSIFSFRGRAKDVGSENDFADDEHST
FEDSESRRDSLFVPHRPGERRNSNVSQASMSSRMVPGLPANGKMHSTVDCNGVVSLVGGP
SALTSPTGQLPPEGTTTETEVRKRRLSSYQISMEMLEDSSGRQRAMSIASILTNTMEELE
ESRQKCPPCWYRFANVFLIWDCCDSWLKVKHLVNLIVMDPFVDLAITICIVLNTLFMAME
HYPMTEQFSSVLTVGNLVFTGIFTAEMVLKIIAMDPYYYFQEGWNIFDGIIVSLSLMELG
LANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVG
MQLFGKSYKECVCKINEDCKLPRWHMNDFFHSFLIVFRVLCGEWIETMWDCMEVAGQTMC
LIVFMLVMVIGNLVVLNLFLALLLSSFSSDNLAATDDDNEMNNLQIAVGRMQKGIDYVKN
KIRECFRKAFFRKPKVIEIHEGNKIDSCMSNNTGVVEISKELNYLKDGNGTTSGVGTGSS
VEKYVIDENDYMSFINNPSLTVTVPIAVGESDFENLNTEEFSSESELEESKEKLNATSSS
EGSTVDVAPPREGEQAEIEPEEDLKPEACFTEGCIKKFPFCQVSTEEGKGKIWWNLRKTC
YSIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILEMLLKW
VAYGFQTYFTNAWCWLDFLIVDVSLVSLVANALGYSELGAIKSLRTLRALRPLRALSRFE
GMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYHCVNMTTGSMFDMSEVN
NFSDCQALGKQARWKNVKVNFDNVGAGYLALLQVATFKGWMDIMYAAVDSRDVKLQPVYE
ENLYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQDIFMTEEQKKYYNAMKKL
GSKKPQKPIPRPANKFQGMVFDFVTRQVFDISIMILICLNMVTMMVETDDQSKYMTLVLS
RINLVFIVLFTGEFLLKLISLRYYYFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTL
FRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFAY
VKKEAGIDDMFNFETFGNSMICLFQITTSAGWDGLLAPILNSAPPDCDPDAIHPGSSVKG
DCGNPSVGIFFFVSYIIISFLVVVNMYIAVILENFSVATEESAEPLSEDDFEMFYEVWEK
FDPDATQFIEFCKLSDFAAALDPPLLIAKPNKVQLIAMDLPMVSGDRIHCLDILFAFTKR
VLGESGEMDALRIQMEDRFMASNPSKVSYEPITTTLKRKQEEVSAAIIQRNYRCYLLKQR
LKNISNTYDKETIKGRIVLPIKGDMVIDKLNGNSTPEKTDGSSSTTSPPSYDSVTKPDKE
KFEKDKPEKESKGKEV
NT seq 5991 nt NT seq  +upstreamnt  +downstreamnt
atggcccaggcactgctggtacccccgggacctgagagcttccgccttttcactcgagaa
tctcttgctgctatcgaaaagcgtgctgcagaagagaaagccaagaaacccaagaaagaa
caagacattgacgatgagaacaagccaaagccaaacagtgacttggaagctgggaagaac
cttccatttatctatggagacattcctccagagatggtgtcggagcctctggaggacctg
gacccctactacgtcagtaagaaaacttttgtagtgttgaataaagggaaggcaattttt
cgattcagtgccacctccgccttgtatattttaactccactaaaccccgttaggaaaatt
gctattaagattttggtacactctttattcagcatgcttatcatgtgcactattttgacc
aactgtgtatttatgacattgagcaatcctcctgactggacgaagaatgtagagtacaca
ttcactgggatctatacctttgagtcacttataaagatcttggccagaggattctgctta
gaagatttcacatttcttcgtgacccatggaactggctggatttcagtgtcatcgtgatg
gcatatgtgacagagtttgtggacctgggcaatgtctcagcgctgagaacgttcagagtt
ctccgagcattgaaaacaatatcagtcattccaggtttaaagaccatcgtgggggccctg
atccagtcggtgaagaagctgtctgacgtcatgatactcactgtgttctgtctgagcgtc
tttgctctcatcgggctgcagctcttcatgggcaacctgaggaataaatgcttgcagtgg
cctccaagcgattctgcttttgagatcaacactacttcctacttcaatggcacaatggac
tcaaatgggacatttgttaatgtaacaatgagcacattcaactggaaggactatatcgca
gatgacagccacttttatgttttggatggacaaaaagatcctttactttgtggaaatggg
tccgatgcaggacaatgtccagaagggtacatctgtgtgaaggctggacgaaaccccaac
tacggttacacgagctttgacacatttagctgggccttcttatcgctgtttcgactcatg
actcaagactactgggagaacctttaccagttgacattacgtgcagctgggaaaacctac
atgatctttttcgtcctggtaattttcttgggctcattttatttggtgaacttgatcctg
gctgtggtggccatggcctatgaggaacaaaatcaggccacactggaggaggctgagcag
aaagaggcggagtttcagcagatgttggagcagttgaaaaagcagcaagaggaggctcag
gcggtggcagctgcctcagcagcgtccagagacttcagtgggataggagggttaggagaa
cttctggagagttcttcagaagcttccaagttgagctccaagagtgccaaggagtggagg
aatcggaggaagaagaggagacagagggagcacttggagggaaaccacagacccgaagga
gacaggtttcccaagtcggaatcagaagacagcgtcaagcgaaggagtttcctgttctcc
ctggatgggaacccgctgagcggcgacaagaagctgtgctctccccatcagtctctcttg
agtatccgtggctccctgttttccccaagacgcaatagcaaaacgagcattttcagcttc
agaggtcgggcgaaggacgtggggtctgagaatgactttgcggatgatgaacacagcacc
tttgaagatagcgagagcaggagagactcactgtttgtgccgcacagacctggagagcga
cgcaacagtaacgttagtcaggccagtatgtcatccaggatggtgccagggcttccagcc
aatgggaagatgcacagcactgtggattgcaatggtgtggtttccttggtgggtggaccc
tcagctcttacgtcacctactggacagcttccgccagagggtaccaccactgaaacagaa
gtcaggaagagaaggctaagttcttaccagatctcgatggaaatgctggaggattcctct
gggagacaaagagccatgagcatagccagtatcctgaccaacacgatggaggaacttgaa
gaatctagacagaagtgtccaccatgctggtatagatttgccaatgtgtttttgatctgg
gactgttgtgattcatggttgaaagtaaagcatcttgtgaatttgattgtgatggatcca
tttgttgacctggccatcaccatctgcatcgtgttaaacacactgttcatggccatggag
cactacccgatgacggagcagttcagcagtgtgctgacggtgggaaacctggtcttcacc
gggatcttcacagccgagatggtcctgaaaatcatcgcaatggatccctattactatttc
caagagggctggaatatctttgatggaattattgttagcctgagtttaatggagcttggc
ctggcaaacgtggaggggctgtccgtgcttcggtccttcagactgctgcgagtcttcaag
ttggcaaaatcctggcccacactgaatatgctcattaagatcatcggcaactcggtgggc
gcactgggcaacctgaccctggtgctggccatcatcgtcttcatttttgccgtggtcggc
atgcagctgtttggaaagagctacaaggagtgtgtttgcaagatcaatgaggactgcaag
ctcccgcgctggcacatgaacgacttcttccactccttcctgatagtgttccgcgtgctg
tgtggggagtggatagagaccatgtgggactgcatggaggtcgcgggccagaccatgtgc
cttattgtgtttatgttggtcatggtgattgggaaccttgtggttctgaacctcttcctg
gccttattgttgagttcctttagttcagacaaccttgctgctacggacgatgataacgaa
atgaacaacctccagatcgcggtgggaaggatgcaaaaggggattgattatgtgaaaaat
aagatacgggagtgcttccgaaaagcgttttttagaaagccgaaagtgatagaaatccac
gaagggaacaaaatagacagctgcatgtccaataacacgggcgtagttgaaataagcaaa
gagcttaactaccttaaagacggtaacggaaccaccagtggcgtgggtactggaagcagt
gtggagaaatacgtaattgatgaaaatgactacatgtcattcatcaacaaccccagcctc
accgtgacggtgccaattgccgtgggagagtctgactttgaaaatttaaacacggaagag
tttagcagtgagtcagaactggaagaaagcaaggagaaattaaatgcaaccagctcttct
gaaggaagcacagttgacgttgctccgccccgagaaggtgaacaagctgaaattgaacct
gaggaggaccttaagccagaagcttgctttactgaaggatgcattaaaaaatttcccttc
tgccaagtaagtacggaagaaggtaaaggaaaaatctggtggaatcttaggaagacctgc
tatagcattgtggaacacaactggtttgagacgttcattgtgttcatgattctcctcagt
agtggtgctttggcctttgaagatatatacattgagcaacggaagaccatcaaaaccatg
ctggagtatgctgacaaagtcttcacttacatcttcatcctggaaatgctcctcaaatgg
gtggcctatggatttcaaacctatttcaccaatgcctggtgctggttggacttcttgatt
gttgatgtttctttggttagcctggtggccaacgctcttggctattcagaacttggtgcc
atcaaatccctacggaccctgagagctctgaggccgctccgagccttatcccgctttgaa
ggcatgagggtggttgtgaacgctcttgttggtgcaatcccctccatcatgaatgtgcta
ctggtgtgcctcatcttctggttaatctttagtatcatgggtgtgaatctgtttgctgga
aagttctatcactgtgttaacatgacaacgggcagcatgttcgacatgagtgaagtcaac
aatttcagcgactgtcaggctcttggcaagcaagcccgatggaagaatgtgaaagtcaac
tttgacaatgttggggctggctacctggcattgctgcaagtggccacattcaaaggctgg
atggatattatgtatgcagctgtggattcacgggacgtcaaactgcagcctgtatatgaa
gaaaatctgtacatgtatctgtactttgtcatcttcatcatctttgggtcgttcttcact
ctaaatctattcatcggcgtcatcatagacaacttcaaccagcagaagaagaagtttgga
ggtcaagacatctttatgacagaagagcagaaaaagtactacaatgcaatgaagaaactt
ggctccaaaaaacctcagaagcccatccctcgacctgcaaacaaatttcaaggaatggtc
tttgactttgtaaccagacaagtgtttgacatcagcatcatgatcctcatctgcctcaac
atggtgaccatgatggtggaaacggacgaccagagcaaatacatgaccctggttttgtcc
cgaatcaacctggtattcatcgtcctcttcactggggagtttctgctgaagctcatctct
ctcagatactactacttcacgattggctggaacatctttgactttgtggtggtgattctc
tcaattgtaggaatgttccttgctgagctgatagagaagtattttgtgtctcctaccctg
ttccgagtcatccgcctggccaggattggacgaatcctacgcctgatcaaaggcgccaag
gggatccgcacgctgctctttgctctgatgatgtcccttcctgcgctgttcaacatcggc
ctcctgcttttcctcgtcatgttcatctacgccatctttgggatgtccaactttgcctat
gttaaaaaagaggctggaattgatgacatgttcaactttgagacttttggcaacagcatg
atctgcctgttccaaatcaccacctctgcgggctgggatggactgttggcccccatcctc
aacagtgcacctcctgactgtgaccctgatgcaattcaccctggaagctcagtgaaggga
gactgtgggaacccatctgtggggattttcttttttgtcagctacatcatcatatccttc
ctggttgtggtgaacatgtacattgctgtcatcctggagaacttcagcgttgccacagaa
gaaagtgcagagcccctgagtgaggacgactttgagatgttctacgaggtctgggagaag
ttcgaccctgacgccacccagttcatagagttctgcaagctctctgactttgcagctgcc
ctggatcctcccctcctcatcgcaaagccaaacaaagtccagctcattgccatggacctg
cccatggtgagtggagaccgcatccactgcctggacatcttatttgcttttacaaagcgg
gtcctgggtgagagtggagagatggatgcccttcgaatccagatggaagatcggttcatg
gcttccaatccctccaaggtctcttatgagcccattaccaccactctgaagcgcaaacaa
gaggaggtgtctgctgctatcattcagcgtaattacagatgttatcttttaaagcaaagg
ttaaaaaacatatcaaatacgtatgacaaagagacaatcaaggggaggattgtcttgcct
ataaaaggagatatggttattgacaaattaaatgggaattccaccccagaaaagacagat
gggagttcctctaccacctctcctccttcctatgacagtgtaacaaaaccagataaggaa
aagtttgagaaagacaaaccagaaaaagaaagcaaagggaaagaggtctga

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