KEGG   Mus musculus (house mouse): 20353
Entry
20353             CDS       T01002                                 
Symbol
Sema4c, M-Sema_F, Semacl1, Semaf, Semai, sema_I
Name
(RefSeq) sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4C
  KO
K06521  semaphorin 4
Organism
mmu  Mus musculus (house mouse)
Pathway
mmu04360  Axon guidance
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09150 Organismal Systems
  09158 Development and regeneration
   04360 Axon guidance
    20353 (Sema4c)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04090 CD molecules [BR:mmu04090]
    20353 (Sema4c)
CD molecules [BR:mmu04090]
 Proteins
  20353 (Sema4c)
SSDB
Motif
Pfam: Sema PSI Sema4F_C I-set Ig_3 ig Ig_2
Other DBs
NCBI-GeneID: 20353
NCBI-ProteinID: NP_001119519
MGI: 109252
Ensembl: ENSMUSG00000026121
UniProt: Q64151
Position
1:complement(36587720..36599780)
AA seq 834 aa
MAPHWAVWLLAAGLWGLGIGAEMWWNLVPRKTVSSGELVTVVRRFSQTGIQDFLTLTLTE
HSGLLYVGAREALFAFSVEALELQGAISWEAPAEKKIECTQKGKSNQTECFNFIRFLQPY
NSSHLYVCGTYAFQPKCTYINMLTFTLDRAEFEDGKGKCPYDPAKGHTGLLVDGELYSAT
LNNFLGTEPVILRYMGTHHSIKTEYLAFWLNEPHFVGSAFVPESVGSFTGDDDKIYFFFS
ERAVEYDCYSEQVVARVARVCKGDMGGARTLQKKWTTFLKARLVCSAPDWKVYFNQLKAV
HTLRGASWHNTTFFGVFQARWGDMDLSAVCEYQLEQIQQVFEGPYKEYSEQAQKWARYTD
PVPSPRPGSCINNWHRDNGYTSSLELPDNTLNFIKKHPLMEDQVKPRLGRPLLVKKNTNF
THVVADRVPGLDGATYTVLFIGTGDGWLLKAVSLGPWIHMVEELQVFDQEPVESLVLSQS
KKVLFAGSRSQLVQLSLADCTKYRFCVDCVLARDPYCAWNVNTSRCVATTSGRSGSFLVQ
HVANLDTSKMCNQYGIKKVRSIPKNITVVSGTDLVLPCHLSSNLAHAHWTFGSQDLPAEQ
PGSFLYDTGLQALVVMAAQSRHSGPYRCYSEEQGTRLAAESYLVAVVAGSSVTLEARAPL
ENLGLVWLAVVALGAVCLVLLLLVLSLRRRLREELEKGAKASERTLVYPLELPKEPASPP
FRPGPETDEKLWDPVGYYYSDGSLKIVPGHARCQPGGGPPSPPPGIPGQPLPSPTRLHLG
GGRNSNANGYVRLQLGGEDRGGSGHPLPELADELRRKLQQRQPLPDSNPEESSV
NT seq 2505 nt   +upstreamnt  +downstreamnt
atggccccacactgggctgtctggctgctggcagcagggctgtggggcctgggcatcggg
gctgagatgtggtggaaccttgtgccccggaagacagtatcttctggggagctggtcaca
gtagtgaggcggttctcccagacaggcatccaggacttcctgacactgaccctgacagaa
cattctggccttttatatgtgggggcccgagaggcgctgtttgccttcagtgtagaggct
ctggagctgcaaggagcgatctcttgggaggctccagctgagaagaaaattgaatgtacc
cagaaagggaagagcaaccagaccgaatgcttcaacttcatccgcttccttcagccatac
aattcctcccatctgtatgtctgcggcacctatgccttccagcccaagtgcacctacatc
aacatgctcacgttcaccttggaccgtgcagaatttgaggatgggaagggtaaatgccca
tatgacccagctaagggtcacaccggactccttgtggacggtgagctgtactcagccaca
ctcaataacttcctgggcacagagccggttatccttcgatacatggggacccaccactcc
atcaagacagagtacctggctttttggctgaatgaaccccactttgtaggctctgccttt
gtccctgagagtgtgggaagcttcacgggagacgatgacaagatctacttcttcttcagt
gagcgggcagtggagtatgactgctattccgagcaggtggtggctcgtgtggcgagagtc
tgtaagggtgacatggggggagcacggacgctgcagaagaaatggacgacgttcctgaag
gctcggttggtgtgctcagcccctgactggaaggtctacttcaaccagctgaaggcggtg
cacaccctgcggggcgcctcttggcacaacaccaccttcttcggggtttttcaagcgcga
tggggcgatatggacctgtctgcagtttgtgagtaccagttggaacagatccagcaagtg
tttgagggtccctacaaggagtacagtgagcaagcccagaagtgggcccgctatactgac
ccggtacccagccctcggcctggttcgtgtatcaacaactggcaccgagacaatggctac
accagttccctggaactgccggacaacaccctcaacttcatcaagaagcaccccctgatg
gaggaccaggtgaagcctcggttgggccgccccctacttgtgaagaagaacactaacttc
acacacgtggtggccgacagggtcccagggcttgatggtgccacctatacagtgttgttc
attggtacaggagatggctggctgctgaaggctgtgagcctggggccctggatccacatg
gtggaggaactgcaggtgtttgaccaggagccagtggaaagtctggtgctgtctcagagc
aagaaggtgctctttgctggctcccgctctcagctggttcagctgtctctggccgactgc
acaaagtaccgtttctgtgtagactgtgtcctggccagggacccttactgtgcctggaat
gtcaacaccagccgctgtgtggccaccaccagtggtcgctcggggtcctttctggtccaa
catgtggcgaacttggacacttcaaagatgtgtaaccagtatggcattaaaaaagtcaga
tctattcccaagaacatcaccgttgtgtcaggcacagacctggtcctaccctgccacctc
tcgtccaatttggcccatgcccactggaccttcggaagccaggacctgcctgcagaacaa
cctggctcctttctttatgacacgggactccaggcgctggtggtgatggccgcacagtcc
cgtcactctggaccctatcgttgctattcagaggagcaggggacaagactggctgcagaa
agctaccttgttgctgtcgtggccggctcgtcggtgacactggaggcacgggctcccttg
gaaaacctggggctcgtgtggctcgctgtggtggccctgggggctgtgtgcctggtgctg
ctgctgctggtcctatcgctccgccggcgacttcgagaagagctagaaaagggtgccaag
gcatctgagaggacactggtgtaccccttggaactgcccaaggagcctgccagtcccccc
ttccgtcctggccccgaaactgatgagaaactttgggatcctgtcgggtactactattcg
gatggctctctcaagattgtgcctggtcacgcccggtgccagcctgggggtgggccccct
tccccacctcctggcatacctggccagcctctgccttctccaactcggctccacctagga
ggtggtcggaactcaaatgccaatggttatgtgcgtttacagttgggcggagaggaccga
ggaggatctgggcacccactgcctgagctcgcggatgaattacgacggaaactacaacag
cgccagccgctgcctgactccaacccagaggagtcttcagtatga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (21)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (14)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (1)   
   OC (1)   
Protein sequence (16)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (14)   
DNA sequence (32)   
   RefSeq(nuc) (14)   
   GenBank (9)   
   EMBL (9)   
Protein domain (7)   
   Pfam (7)   
All databases (80)   

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