KEGG T01002: 21343

Mus musculus (mouse): 21343

Entry

21343 CDS T01002

Gene name

Taf6, 80kDa, AW549759, TAF(II)80, TAFII70, Taf2e, p80

Definition

TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor

Orthology

K03131

transcription initiation factor TFIID subunit 6

Organism

mmu Mus musculus (mouse)

Pathway

mmu03022	Basal transcription factors
mmu05168	Herpes simplex infection

Class

Genetic Information Processing; Transcription; Basal transcription factors [PATH:mmu03022]
Human Diseases; Infectious diseases; Herpes simplex infection [PATH:mmu05168]

SSDB

Motif

Pfam:

DUF1546 TAF Bromo_TP TFIID-18kDa Histone

Other DBs

NCBI-GI:

NCBI-GeneID:

MGI:

Ensembl:

Vega:

UniProt:

Position

5 G2; 5

AA seq 678 aa
MAEEKKLKLSNTVLPSESMKVVAESMGIAQIQEETCQLLTDEVSYRIKEIAQDALKFMHM
GKRQKLTTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDIINT
PLPRVPLDVCLKAHWLSIEGCQPAIPENPPPAPKEQQKAEATEPLKSAKPGQEEDGPLKG
KGQGAAAADGKGKEKKAPPLLEGAPFRLKPRSIHELSVEQQLYYKEITEACVGSCEAKRA
EALQSIATDPGLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLYLEKY
VHELIPAVMTCIVSRQLCLRPDVDNHWALRDFAARLVAQICKHFSTTTNNIQSRITKTFT
KSWVDEKTPWTTRYGSIAGLAELGHDVIKTLILPRLQQEGERIRSVLDGPVLSNIDRIGA
DHVQSLLLKHCAPVLAKLRPPPDNQDAYRGEFGSLGPLLCSHVVKARAQAALQAQQVNRT
TLTITQPRPTLTLSQAPQPGPRTPGLLKVPGSIALPVQTLVSARAAAPPQPSPPPTKFIV
MSSSSSASSTQQVLSLSTSAPGSGSTTTSPVTTTVPSVQPIVKLVSTATTAPPSTAPAGS
GSVQKYIVVSLPPTGEGKGGPPSHPSPVPPSSSSPSPLGGSTLCGGKQEAGDSPPPAPGT
PKANGSQPTGPGSPQPAL

NT seq 2037 nt +upstreamnt +downstreamnt
atggccgaggagaagaaactgaaactcagcaatactgtgttgccctctgagtccatgaag
gtggtggcagaatctatgggcattgctcagattcaggaggagacttgccagctactgaca
gatgaggtcagctaccgcatcaaggagattgcccaggatgccctgaagttcatgcacatg
gggaaacgacagaagctcactaccagtgacattgactatgcattgaagttaaagaatgtg
gagccactgtatggcttccatgctcaggagttcatccctttccggtttgcctctggcggg
ggccgggagctgtacttctatgaagagaaggaagtggacctgagtgacatcatcaacacc
cctctgcctcgggtgcctctggatgtctgcctcaaagctcattggctaagcatcgaaggc
tgccagccagctataccagagaatccacccccagctcccaaagagcagcagaaggctgag
gccacagaacccctgaaatcagcaaagccaggccaagaagaagatggacccctgaaaggc
aaaggtcaaggggcagctgcagctgatggcaaaggaaaagagaagaaggcacctcccttg
ctggagggggcccctttccgcctgaagccccgcagcatccatgagctgtctgtggagcag
cagctgtattacaaggagatcacggaagcctgtgtgggatcctgtgaggccaagagagcg
gaagctctgcagagcattgccacggacccagggctctatcagatgctaccacggttcagt
accttcatctcagagggggtccgtgtgaatgtagttcagaataacctggccttgcttatc
tacctgatgcgtatggtgaaggccctgatggacaaccccacactgtatctagagaaatat
gtgcatgagctcattccagcagtaatgacctgcattgtgagtagacagctgtgcttgcgg
ccagatgtggacaatcactgggcactccgggattttgctgcccgtctagtggcccaaatc
tgtaagcatttcagcacaaccaccaacaacatccaatcccgaatcactaagacctttacc
aagagctgggtcgacgagaagactccatggacaactcgatatggctccattgcaggccta
gcagagctgggacatgatgtgattaagacgctaattctgccaaggctgcagcaggaaggg
gaacggatccgcagtgtcttggatgggcctgtgctgagcaacatcgaccgtattggagca
gaccatgtgcagagccttctcctgaaacactgtgccccagtactggccaagctgcgccct
ccacctgacaatcaggatgcctaccggggagaatttgggtcccttgggccccttctctgt
tcccatgtggtgaaggccagggcccaggctgctctacaagctcagcaggtcaacaggacc
acactcaccatcacacagcctcggcccacactgaccctttcacaggcccctcagccaggc
cctcgcacgcctggcttattgaaggtccctggctccattgccttgcctgttcagacactg
gtgtctgcgagagctgctgctcctcctcagccttctcctcctccaaccaagtttattgta
atgtcctcatcttccagtgcctcatcaacccagcaggttctgtccctcagcacctcagct
cctggctcaggctctactactacctctcctgtcaccaccacggttcccagcgtgcagccc
atcgtcaagctggtctccactgctaccactgcacccccaagcacagcccctgctggttct
ggcagtgttcagaaatacattgtggtctctcttcccccaacaggggaaggcaaaggaggc
cctccttctcatccttctccagtccccccttcatcttcttcaccatccccacttggggga
agtaccctctgtggggggaagcaggaagctggggacagcccccctccagctccagggact
ccaaaggctaatggctcgcagcctactggacctggctctccccagcctgctctgtga

All links

Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (3)   
   UniGene (1)   
   ENSEMBL-MMU (1)   
   MGI-MMU (1)   
   OC (1)   
   VEGA (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (29)   
   RefSeq(nuc) (1)   
   GenBank (14)   
   EMBL (14)   
Protein domain (5)   
   Pfam (5)   
All databases (49)   

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