KEGG   Mus musculus (house mouse): 234699
Entry
234699            CDS       T01002                                 
Symbol
Edc4
Name
(RefSeq) enhancer of mRNA decapping 4
  KO
K12616  enhancer of mRNA-decapping protein 4
Organism
mmu  Mus musculus (house mouse)
Pathway
mmu03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    234699 (Edc4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mmu03019]
    234699 (Edc4)
Messenger RNA biogenesis [BR:mmu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     234699 (Edc4)
  mRNA degradation factors
   5'-3' decay
    Decapping complex
     234699 (Edc4)
SSDB
Motif
Pfam: Ge1_WD40 EDC4_C WD40 DUF445
Other DBs
NCBI-GeneID: 234699
NCBI-ProteinID: NP_001288029
MGI: 2446249
Ensembl: ENSMUSG00000036270
UniProt: Q3UJB9 G5E896
Position
8:106607506..106619857
AA seq 1406 aa
MASCASIDIEDATQHLRDILKLDRPAGGSNAESQRPSSAYNGDLNGLLVPDPLSSGDGNS
TNKPGIRTMPPINLQEKQVICLSGDDSSTCIGILAKEVEIVASSDSSISSKARGSNKVKI
QPVAKYDWEQKYYYGNLIAVSNSFLAYAIRAANNGSAMVRVISVSTSERTLLKGFTGSVA
DLAFAHLNSPQLACLDEAGNLFVWRLALVKGKIQEEILVHIRQPEGTALNHFRRIIWCPF
IPEESEDCCEESSPTVALLHEDRAEVWDLDMLRSSHNTWPVDVSQIKQGFIVVKGHSTCL
SEGALSPDGTVLATASHDGFVKFWQIYIEGQDEPRCLHEWKPHDGRPLSCLLFCDNHKKQ
DPEVPFWRFLITGADQNRELKMWCTVSWTCLQTIRFSPDIFSSVSVPPSLKVCLDLSAEY
LILSDVQRKVLYVMELLQNQDEGRACFSSISEFLLTHPVLSFGIQVVSRCRLRHTEVLPA
EEENDSLGTESSHGAGALESAAGVLIKLFCVHTKALQDVQIRFQPQLNPDVVAPLSTHTA
HEDFTFGESRPELGSEGLASAAHGSQPDLRRIVELPAPADFLSLSSETKPKLMTPDAFMT
PTASLQQISASPSSSSSSSSSSSSSSSSSSSSLTAVSAVSSSSAMDPSLPRPPEELTLSP
KLQLDGSLTLNSSSSSLQASPRSLLPGLLPGPADKLISKGPGQVSTAASALSLDLQEVEP
LGLPQASPSRTRSPDVISSASTALSQDIPEIASEALSRGFGSSVPEGLIEPDSMASAASA
LHLLSPRPRQGPELGSQLGLDGGPGDGDRHSTPSLLEAALTQEVATPDSQVWPTAPDITR
ETCSTLTESPRNGLQEKHKSLAFHRPPYHLLQQRDSQDTSAEQSDHDDEVASLASASGGF
GSKIPTPRLPSKDWKTKGSPRTSPKLKRKSKKDDGDSAVGSRLTEHQVAEPPEDWPALIW
QQQRELAELWHNQEELLQRLCAQLEGLQSTVTDHVERALETRHEQEQRRLERALAEGQQR
GGQLQEQLTQQLSQALSSAVAGRLERSVRDEIKKTVPPCVSRSLEPVAGQLSNSVATKLT
AVEGSMKENISKLLKSKNLTDAIARAAADTLQGPMQAAYREAFQSVVLPAFEKSCQAMFQ
QINDSFRLGTQEYLQQLESHMKSRKAREQEAREPVLAQLRGLVSTLQSATEQMAATVSSS
VRAEVQHQLHVAVGSLQESILAQVQRIVKGEVSVALKEQQATVTSSIMQAMRSAAGTPVP
SAHLDCQAQQAHILQLLQQGHLNQAFQQALTAADLNLVLYVCETVDPAQVFGQPPCPLSQ
PVLLSLIQQLASDLGTRSDLKLSYLEEAVMHLDHSDPITRDHMGSVMAQVRQKLFQFLQA
DPHNSLSKAARRLSLMLHGLVTPSLP
NT seq 4221 nt   +upstreamnt  +downstreamnt
atggcctcctgcgcgagcatcgacattgaggacgccacgcagcatctgcgggacatactc
aaactggaccggcccgccggaggttccaatgccgaaagccaaaggccatccagtgcctac
aatggagacctcaatgggctcctggtccccgacccgctcagttcaggtgatggtaactca
acgaacaaacctggtatacggaccatgccacccattaacctgcaggaaaagcaggtcatt
tgcctctctggagatgacagctccacctgcattgggattttagccaaggaagtggaaatt
gtggccagcagtgattctagcatttccagcaaggctcgggggagcaacaaggtgaaaatc
cagcctgtcgccaagtatgactgggagcagaaatactactatggcaacctgattgcagtg
tctaactccttcttggcatacgccattagggctgccaacaatggctcagcaatggtccgt
gtgatcagtgtcagcacttcggagcggaccctgctcaaaggtttcacaggcagtgtggct
gatcttgcttttgcacacctcaactctccacagctcgcctgcctggatgaggctggcaat
ctttttgtgtggcgcttggctcttgttaagggtaaaattcaagaagagattttagtccat
atccggcagccagagggtacagcgctgaaccacttccgaaggatcatctggtgccctttc
atccccgaggagagtgaggactgttgtgaggagagcagcccgacagtggccctgctgcat
gaggatcgggctgaggtgtgggacttggatatgcttcgctccagccacaacacctggcct
gtggatgtcagccaaatcaagcaaggctttattgtggtgaaaggccatagcacgtgccta
agtgaaggagccctctcccctgatgggactgtcctggctaccgcaagccatgatggcttt
gtcaagttctggcagatctatattgaaggtcaggatgagccaaggtgtctgcatgaatgg
aagcctcatgatgggaggcctctttcttgcctcctgttctgtgataaccataagaaacag
gatcctgaggtcccgttctggaggttcctcataaccggcgccgaccagaatcgagagctg
aagatgtggtgcacagtgtcctggacctgcctgcaaaccattcgcttctccccagatatc
ttcagctcagtgagtgtgcctcccagcctcaaagtttgtttggacctctcagcagagtat
ttgattcttagtgatgtgcaacgaaaggtcctctatgtgatggagctgctgcagaaccag
gacgagggccgcgcgtgctttagttctatctctgagttcctgctcacccaccctgtgctg
agctttggcatccaggttgtcagtcgctgccggctacggcacactgaggtcctgcctgct
gaggaggagaatgacagtctggggaccgagagttcccatggagctggagccttggaatcc
gcagctggtgtgcttatcaagctcttttgtgtgcacactaaggcactacaagatgtgcag
atccgcttccagccacagctgaaccctgatgtggtggccccactctctacccacactgcc
cacgaggacttcacatttggagagtctcgacctgaactaggctccgaggggctagcttca
gctgctcatggttcccagcctgacctgcggcgcattgtggaactgcctgctcctgcagac
ttcctcagtctgagcagtgagaccaagcccaagttgatgacacctgatgctttcatgaca
cctactgcctccctgcagcagatctctgcatcccctagtagtagcagcagcagtagcagc
agcagcagtagcagcagcagcagcagcagcagctctctaacagctgtgtctgctgtgagc
agctcctcagccatggacccttccttgcccagaccacctgaggagctgaccttgagcccc
aagctgcagctagatggcagcctgacgctaaacagcagcagcagcagcctgcaggcaagc
cctcgaagcctccttccgggcctgctcccaggcccagctgacaagttgatttccaaggga
cctggtcaggtatccactgctgcctctgcactgtccttggatttgcaggaagtggagcca
ttagggctaccccaggcctccccaagtcgaacccgttctcctgatgtgatctcctcagca
tccactgccctgtcccaggacattcctgaaatcgcatctgaggccctgtcccgtggcttt
ggctcctctgttcctgagggcctcattgagccagacagcatggcctcagctgcctcagca
ctacacctactctctcctcggcccaggcaaggccctgagcttggctctcagctgggtctg
gatggaggccctggagatggggataggcatagtaccccttccctgctggaagcagccctg
acccaggaagttgcaacccctgacagtcaagtctggcctacggcacctgacattactcgt
gagacctgtagcacactgacagaaagccccaggaatggcctccaggaaaagcacaaaagt
ctggctttccacaggccaccttatcacttgctgcagcaacgtgacagtcaggacacaagt
gctgagcaaagtgaccatgatgatgaggttgccagccttgcctctgcctcaggaggtttt
ggcagcaaaattcctactccacggctgccttccaaggattggaagacgaagggatcccct
cggacgtcacctaagctcaagagaaaaagcaagaaggatgatggggattcagctgtggga
tcccggctcacagagcaccaggtggcagagccccctgaagactggccagcactaatttgg
cagcagcaaagagagctggcagagctatggcacaaccaagaagaactgctacagcgtctc
tgtgcccagcttgaaggtcttcagagtactgtcacagaccatgtagagcgtgccctggag
acgcggcatgagcaggagcaacggcggctggaacgggcactggctgaggggcagcaacgg
ggtgggcagctgcaggagcagctgacacagcagctatcccaggcattgtcttcagctgtg
gctgggcggctagagcgcagcgtaagggatgaaatcaagaaaacggttcctccatgtgtc
tccagaagtctggagcctgttgcaggtcaactaagcaactcagtggctaccaagcttaca
gctgtggaaggcagcatgaaagagaatatctctaagctactcaagtccaagaacttaaca
gatgccattgcccgagcagctgcagacacgttacagggaccaatgcaggctgcctaccgg
gaagccttccagagtgtggtactgccagcttttgagaagagttgccaggctatgttccag
caaatcaatgacagctttaggctgggcacacaggaatatttgcagcagctggagagtcac
atgaagagccggaaggcccgtgaacaagaagctagggagcctgtgctggcccagcttcgg
ggcctggtcagcacactgcagagtgccaccgagcagatggcggccactgtatctagcagt
gttcgggccgaggtgcaacaccagctgcatgtggctgtgggcagcttgcaggagtcaatc
ttagcacaagtacagcgcattgtcaagggtgaagtgagtgtggcacttaaggagcagcag
gccaccgtcacttccagcatcatgcaggctatgcgttcagctgctggcacacctgtcccc
tctgcccaccttgactgccaggcccaacaagcccatatcttgcagttactgcagcagggc
cacctcaatcaggccttccagcaggcactgactgctgctgatctcaatctggtgctgtat
gtgtgtgaaactgtcgacccagcccaggtttttgggcagccgccctgtccactatcccag
cctgttctcctttccctaatccagcagctagcatctgaccttggaactagaagtgacctc
aagctcagctacttggaagaagctgtgatgcacctggaccacagcgatcccatcactcga
gaccacatgggctctgtcatggctcaggtgcgccagaagctcttccagttcctgcaggct
gatccacacaactcacttagcaaagctgcccgccgcctcagcctaatgttacacggcctt
gtgacccctagcctcccttag

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