KEGG T01002: 269523

Mus musculus (mouse): 269523

Entry

269523 CDS T01002

Gene name

Vcp, 3110001E05, CDC48, p97, p97/VCP

Definition

valosin containing protein (EC:3.6.4.6)

Orthology

K13525

transitional endoplasmic reticulum ATPase

Organism

mmu Mus musculus (mouse)

Pathway

mmu04141	Protein processing in endoplasmic reticulum
mmu05134	Legionellosis

Module

mmu_M00400	p97-Ufd1-Npl4 complex
mmu_M00403	HRD1/SEL1 ERAD complex

Class

Genetic Information Processing; Folding, sorting and degradation; Protein processing in endoplasmic reticulum [PATH:mmu04141]
Human Diseases; Infectious diseases; Legionellosis [PATH:mmu05134]

SSDB

Motif

Pfam:

AAA CDC48_N AAA_16 AAA_17 RuvB_N AAA_22 CDC48_2 AAA_33 AAA_5 AAA_2 TIP49 AAA_14 IstB_IS21 AAA_25 Zeta_toxin AAA_18 Arch_ATPase Vps4_C RNA_helicase AAA_19 Mg_chelatase AAA_28 Parvo_NS1 KaiC NACHT Sigma54_activ_2 ABC_tran DUF815 Bac_DnaA ResIII AAA_24 Viral_helicase1 NB-ARC Sigma54_activat PhoH AAA_3 DUF2075 AAA_11 ATP-synt_ab DNA_ligase_A_C

Other DBs

NCBI-GI:

NCBI-GeneID:

MGI:

Ensembl:

Vega:

UniProt:

Structure

PDB:

1S3S 3CF0 3CF2 1R7R 3CF3 3CF1 2PJH 1E32

Position

4 A5; 4 22.95 cM

AA seq 806 aa
MASGADSKGDDLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLK
GKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPID
DTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDT
VIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRG
ILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAI
IFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRF
GRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAAL
QAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDIG
GLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFI
SIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRV
INQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKAN
LRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIESEIRRERERQTNPSAM
EVEEDDPVPEIRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGSFRFPSGNQGG
AGPSQGSGGGTGGSVYTEDNDDDLYG

NT seq 2421 nt +upstreamnt +downstreamnt
atggcctctggagccgattcaaaaggtgatgatttatcaacagccattctcaaacagaag
aaccgacccaatcggttaattgttgatgaagccatcaatgaagataacagcgtggtgtcc
ttgtcccagcccaagatggatgaactgcagttgttccgaggtgacacggtgttgctaaaa
ggaaagaaaagacgggaagctgtatgcattgttctttctgatgacacgtgttctgatgag
aagattcgaatgaatagagttgttcggaataacctccgagttcgcctaggagatgtcatc
agcatccagccatgccctgatgtaaagtatggcaaacgtatccacgttctacccatcgat
gacacagtggaaggcatcactggcaatctctttgaggtataccttaagccgtacttcctg
gaagcttatcggcccatccgtaaaggagatatttttcttgtccggggtgggatgcgtgct
gtggagttcaaagttgtagagacagatcccagcccttactgtattgttgctccagacaca
gtgatccactgtgagggggagccaatcaagcgagaggatgaggaggaatccttgaatgaa
gtaggctatgatgacatcggtggttgcaggaagcagctagctcagataaaggagatggtg
gagctgccactgagacatcctgcgctctttaaggcgattggtgtaaagcctcctcgggga
atcttgttgtatgggcctcctgggacagggaagaccctgattgctcgagctgtggcaaat
gaaactggagccttcttctttctgatcaatggtcctgaaatcatgagcaaattggctggt
gagtctgagagcaaccttcgtaaagcctttgaggaagctgaaaagaatgctcctgctatc
atcttcatcgatgagcttgatgccattgcacccaaaagagagaaaactcatggggaagtg
gagcgtcgcatcgtgtctcagttgttgaccctcatggatggcctaaagcagagagcacat
gtgatagttatggcagcaaccaatagacccaacagcattgacccagccctacggcgattt
ggtcgctttgacagagaggtagatattggaatacctgatgctacaggacgtttggagatt
cttcagatccataccaagaacatgaaactggcagatgatgtggacttggaacaggtagcc
aatgagactcatggtcatgttggtgctgatttggcagccctatgttcagaggctgctctg
caggccatccggaaaaaaatggacctcattgacctagaagatgagaccattgatgctgag
gtcatgaattccctggcagttactatggatgacttccggtgggctttgagtcaaagcaac
ccatcagcacttcgggaaactgtggtagaggtgccacaagtaacctgggaagatattgga
ggcctggaggatgtcaaacgtgagcttcaggagttggttcagtatcctgtggaacatcca
gacaaattcctcaaatttggcatgactccctccaaaggcgttcttttctatggacctcct
ggctgtgggaaaaccttactggctaaagccattgctaatgaatgccaggccaacttcatc
tccatcaagggtcctgagctgcttaccatgtggtttggggaatctgaggccaatgtccgg
gaaatttttgacaaggcacggcaagctgccccctgtgtactcttctttgatgagttagat
tcaattgccaaggctcgaggtggtaatattggagatggtggtggagctgctgaccgagtc
atcaatcagatcctgacagaaatggatggcatgtctacaaaaaagaatgtgtttatcatt
ggagctaccaacaggcctgacatcattgatcctgctatcctaagacctggccgtctagat
cagctcatttatatcccacttcctgatgagaagtcccgtgttgccatcctaaaagccaat
ctgcgaaagtccccagttgccaaggatgtggatttggagttcctggctaagatgactaat
ggcttttctggagctgatttgacagaaatttgccaacgggcttgtaaactggccattcgt
gaatctattgagagtgagattaggcgagaacgagagaggcagacaaatccatcggctatg
gaggtagaagaggacgatccagtgcctgagatccgcagagatcactttgaggaagccatg
cgttttgcccgacgttctgtcagcgataatgacattcggaagtatgaaatgttcgcccag
acactgcagcagagtcgaggttttggcagcttcagattcccttcagggaaccagggtgga
gctggtcccagccagggcagtggaggtggcacaggtggcagtgtgtacacagaagacaat
gacgatgacctgtatggctaa

All links

Pathway (4)   
   KEGG PATHWAY (2)   
   KEGG MODULE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (22)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (15)   
   UniGene (1)   
   ENSEMBL-MMU (1)   
   MGI-MMU (1)   
   OC (1)   
   VEGA (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (221)   
   RefSeq(nuc) (1)   
   GenBank (110)   
   EMBL (110)   
3D Structure (8)   
   PDB (8)   
Protein domain (40)   
   Pfam (40)   
All databases (298)   

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