KEGG T00567: Mmwyl1

Marinomonas sp. MWYL1: Mmwyl1_3241

Entry

Mmwyl1_3241       CDS       T00567

Name

(GenBank) excinuclease ABC, C subunit

K03703

excinuclease ABC subunit C

Organism

mmw Marinomonas sp. MWYL1

Pathway

mmw03420

Nucleotide excision repair

Brite

KEGG Orthology (KO) [BR:mmw00001]
09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    Mmwyl1_3241
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mmw03400]
    Mmwyl1_3241
DNA repair and recombination proteins [BR:mmw03400]
Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Mmwyl1_3241

SSDB

Motif

Pfam:

UvrC_RNaseH_dom GIY-YIG HHH_5 UVR HHH HHH_2 HHH_3

Other DBs

NCBI-ProteinID:

ABR72147

UniProt:

A6W0B8

Position

complement(3676445..3678268)

AA seq 607 aa
MSHSEFDPKHFVSNLTTRPGVYRMYDVKGELLYVGKAKNLKNRVASYFRVTGLTTKTMAL
VSRIHTIEIAVTKSETEALLLEQTLIKQHRPPYNILLRDDKSYPYILLSNHPHPALLFRR
GDKADKGTLFGPFPSGSAVKESLNTMQKVFKVRQCEDSTYSNRSRPCLQYQIKRCSGPCV
NLISDEEYELDVRHARMFLQGKDQELTAEITTQMSAAAADMEFERAAELRDQIIQLKHIQ
EQQHVYGQTGEADVIASIIQPGGLCVHVMMVRKGKVVGSKSYYPKMPIEITEGELLSSFI
AQFYLGGIQELPKTLIISHELEDGDALVEGIFETTQKKIEVLSNVRGQRARWLELAKLNA
EQGLQARLSDKRNHFSRITALQKLLGFSEPPMHMECFDISHSSGEATVASCVVFGPDGPD
KKRYRSFNIEGVEPGDDYGAMKQALTRRYKRVKSGELEAPDVLLIDGGKGQLTQAETVLK
ELGLVNIFLLGVAKGDTRKPGLETLYIGSKEDEVVLPPDSAALHLIQHIRDEAHRFAVKS
HRRRRDKKRRHSVLEDIPGIGPNRRKELLTAFGGYQELLSASQEDISKVKGISAKKAEEI
YLYLHKS

NT seq 1824 nt +upstreamnt +downstreamnt
ttgagccattcagaatttgatccgaagcattttgtcagcaatttaaccacacgtccgggc
gtttatcgcatgtacgacgtgaaaggtgagttgctttatgttggaaaagcaaagaatcta
aaaaatcgtgtcgcgagctatttccgtgtgaccggattaacgactaaaaccatggctttg
gttagtcgtattcacaccattgaaatcgctgttactaaaagcgaaacggaagctttactt
cttgagcaaacgcttattaaacaacatcgtccaccgtacaatattttgctacgggacgat
aaatcttatccttatattttgttatcgaatcaccctcatccggctttgctgtttcgtcgc
ggtgataaagctgataaaggtaccttgttcggtccctttccaagtggcagcgccgtaaaa
gaaagtttgaataccatgcaaaaggttttcaaggtgcgccagtgcgaagacagtacctac
tcgaatcgatctcggccttgtttgcaatatcaaattaagcgttgttctgggccttgtgtg
aacttgattagtgatgaagagtacgagctagatgttcgtcacgcacgcatgtttttacaa
ggcaaagatcaagaactcaccgctgaaattaccacgcaaatgagtgctgctgccgcagat
atggaatttgagcgagccgccgagctacgagatcaaatcattcagctcaagcacatccaa
gaacagcagcatgtttatgggcaaacgggtgaagcagacgtcattgcctctataattcag
cccggtggattatgtgttcatgtgatgatggtgcgtaaaggcaaagtcgttggaagcaaa
agctattatccaaaaatgccgatcgaaatcacagaaggcgaattattatcatcttttatc
gctcaattttacttaggtggtattcaagagttacctaagacgcttatcattagtcatgag
ctagaagatggtgatgcgctggtggaaggtattttcgaaaccacccagaaaaaaattgaa
gtgctaagcaatgtcagaggtcagcgtgcccgttggttggaacttgccaaactcaacgca
gagcaaggtttacaggctcgattatcggacaagcgtaatcattttagccgtataaccgcg
ttgcaaaaattgttaggcttctctgaaccgccaatgcacatggaatgttttgatattagt
cattctagtggcgaagctacggtagcctcttgtgtggtgtttgggcctgatgggccggat
aaaaagcgctatcgctcctttaacatcgaaggtgtcgaaccgggtgatgattacggtgcc
atgaagcaagcactcactcgacgctataaacgcgtcaaaagtggtgagctagaagcgcca
gatgtgttgcttattgatggtggtaaaggtcagttaactcaagctgaaactgtattaaaa
gaattgggattagtgaatatcttcttattgggggtcgcaaaaggcgatactcgtaagccg
ggtcttgaaaccttatatatcggctccaaagaagatgaagttgtgttgcctccagattcg
gctgcattgcacttgattcaacatattcgcgatgaagcgcacagatttgcggtcaagagc
catcgccgtagacgagacaagaagcgtcggcactcggtattggaagatattccaggtatc
gggccaaatcgacgtaaagagttgctgacggcctttggtggataccaagagctactatca
gcgagccaggaagatatttcaaaggtgaaagggattagtgccaaaaaagcggaagaaatt
tatctctaccttcataaaagttaa

All links

Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (61)   
   KEGG ORTHOLOGY (1)   
   RefGene (58)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (73)   

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