KEGG   Mycoplasma mycoides subsp. mycoides SC PG1: MSC_0543
Entry
MSC_0543          CDS       T00161                                 
Symbol
ruvB
Name
(GenBank) Holliday junction DNA helicase RuvB
  KO
K03551  holliday junction DNA helicase RuvB [EC:5.6.2.4]
Organism
mmy  Mycoplasma mycoides subsp. mycoides SC PG1
Pathway
mmy03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:mmy00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    MSC_0543 (ruvB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mmy03400]
    MSC_0543 (ruvB)
Enzymes [BR:mmy01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     MSC_0543 (ruvB)
DNA repair and recombination proteins [BR:mmy03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     MSC_0543 (ruvB)
    RecFOR pathway proteins
     MSC_0543 (ruvB)
SSDB
Motif
Pfam: RuvB_N RuvB_C AAA AAA_lid_4 AAA_5 RNA_helicase AAA_14 Sigma54_activ_2 AAA_22 AAA_2 DUF815 nSTAND3 TIP49 AAA_16 Mg_chelatase Sigma54_activat TniB ResIII HTH_Mga AAA_18 Bac_DnaA Rad17 ATPase_2 AAA_24 ABC_tran Cytidylate_kin Hydrolase_4
Other DBs
NCBI-ProteinID: CAE77169
UniProt: Q6MT67
Position
616737..617660
AA seq 307 aa
MFRPEKWEEYIGQTNILDNLKVFIKSAKKQNKVVDHIFIYGPSGYGKTSLAYLLAKQLKT
NIRILNGPNLQKASDIISILTSIKEKDVLFIDEIHAVNKEVLEIIYPVLEENKLNIIIGK
DYNSKVVNIDLPKFTIICATTEINKIPLPLLNRFPINFTMQEYNLEDMSKIIELYCNKFQ
IKLDQDIYLYLASFCRKTPRIAINLIKRIKDHIICDNPKIIDVNYIKKVLDKLEIYELGL
TITEINYLKMITKNKRIGLDNIAHLLNTTPLIIANNIEPFLIRESLIIRTIKEREITYKG
LKYIQNF
NT seq 924 nt   +upstreamnt  +downstreamnt
atgtttagacctgaaaaatgagaagaatatattggtcagactaatattttagataattta
aaagtctttattaaatctgcaaaaaaacaaaataaagttgttgatcatatttttatttat
ggaccaagtgggtatggaaaaactagtttagcttatttactagcaaaacaattaaaaaca
aacattagaattttaaatggtcctaatttacaaaaagccagtgatattatttcaattcta
actagtattaaagaaaaagatgtcttatttattgatgaaattcatgcagttaataaagaa
gtattagaaattatttatccagtattagaagaaaataaactaaatattattataggtaaa
gattataattctaaagttgtaaatattgatttacctaaatttacaattatttgtgctact
actgagattaataaaattcctttacctttgttaaatcgatttccaattaatttcacaatg
caagaatataatttagaagatatgagtaagattattgaattatattgtaataaatttcaa
attaaacttgatcaagatatttatttatatttagctagtttttgtaggaaaactccaaga
attgctattaatttaattaaaagaattaaagatcacatcatttgtgataatcctaaaata
attgatgttaattacattaaaaaagtattagataaattagaaatttatgaactaggttta
acaataactgaaattaattatttaaaaatgattactaaaaataaaagaattggattagat
aatatagcacatttactcaatacaactcctttaattattgcaaataatatagaacctttt
ttaataagagaaagtttaattataagaacaattaaagaaagagaaattacttataaaggt
ttaaaatatattcaaaacttttaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (27)   
   Pfam (27)   
All databases (37)   

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