KEGG   Mycolicibacterium neoaurum VKM Ac-1815D: D174_06450
Entry
D174_06450        CDS       T02959                                 
Name
(GenBank) DNA-directed RNA polymerase subunit beta
  KO
K03043  DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
Organism
mne  Mycolicibacterium neoaurum VKM Ac-1815D
Pathway
mne03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:mne00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    D174_06450
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mne03021]
    D174_06450
   03400 DNA repair and recombination proteins [BR:mne03400]
    D174_06450
Enzymes [BR:mne01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     D174_06450
Transcription machinery [BR:mne03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     D174_06450
DNA repair and recombination proteins [BR:mne03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      D174_06450
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_45 RNA_pol_Rpb2_2 RNA_pol_Rpb2_3 RNA_pol_Rpb2_7 RNA_pol_Rpb2_1
Other DBs
NCBI-ProteinID: AHC24241
UniProt: V5X973
Position
1337463..1340942
AA seq 1159 aa
MAVSSQSKSDSTNSSVPGAPNRISFAKLREPLEVPGLLDVQTDSFEWLVGSDKWRTKAVD
RGDVNPVGGLEEVLAELSPIEDFSGSMSLSFSDPRFDEVKAPVDECKDKDMTYAAPLFVT
AEFINNNTGEIKSQTVFMGDFPMMTEKGTFIINGTERVVVSQLVRSPGVYFDSSIDKATE
KDLHSVKVIPGRGAWLEFDVDKRDTVGVRIDRKRRQPVTVLLKALGWTNEQITERFGFSE
IMMSTLEKDNTAGTDEALLDIYRKLRPGEPPTKESAQTLLENLFFKDKRYDLARVGRYKV
NKKLGLNAGQPITNSTLTEEDVVATIEYLVRLHQGDKVMTAPGGVEVPVEVDDIDHFGNR
RLRTVGELIQNQIRVGLSRMERVVRERMTTQDVEAITPQTLINIRPVVAAIKEFFGTSQL
SQFMDQNNPLSGLTHKRRLSALGPGGLSRERAGLEVRDVHSSHYGRMCPIETPEGPNIGL
IGSLSVYARVNPFGFIETPYRKVTDGVVTDQIDYLTADEEDRHIVAQANSPLDANGRFEE
DRILVRRKGGEVEFVAAEDVDYMDVSPRQMVSVATAMIPFLEHDDANRALMGANMQRQAV
PLVRSEAPLVGTGMELRAAIDAGDVVVADKTGVIEEVSADYITVMADDGSRQTYRMRKFA
RSNHGTCANQRPIVDTGQRVEAGQVLADGPCTENGEMALGKNLLVAVMPWEGHNYEDAII
LSSRLVEEDVLTSIHIEEHEIDARDTKLGAEEITRDIPNVSDEVLADLDERGIIRIGAEV
RDGDILVGKVTPKGETELTPEERLLRAIFGEKAREVRDTSLKVPHGESGKVIGIRVFSRE
DDDELPAGVNELVRVYVAQKRKISDGDKLAGRHGNKGVIGKILPIEDMPFMPDGTPVDII
LNTHGVPRRMNIGQILETHLGWVAKAGWNIEGSPEWAAKLPEGMQSAPADSIVATPVFDG
AQEKELEGLLGSTLPNRDGDVMVNAQGKSELFDGRSGEPFPYPVTVGYMYILKLHHLVDD
KIHARSTGPYSMITQQPLGGKAQFGGQRFGEMECWAMQAYGAAYTLQELLTIKSDDTVGR
VKVYEAIVKGENIPEPGIPESFKVLLKELQSLCLNVEVLSSDGAAIEMRDGDDEDLERAA
ANLGINLSRNESASVEDLA
NT seq 3480 nt   +upstreamnt  +downstreamnt
ttggcagtctcgagccagagcaagtcagattccactaatagctccgttccgggagcgccc
aatcgtatttccttcgccaagctccgcgagcctcttgaggttccggggctgctcgacgtt
cagaccgactcgttcgagtggctggtcggttcggacaagtggcgcaccaaggcagtcgac
cgcggcgatgtgaaccccgttggcggtctggaagaggtccttgccgaactctccccgatc
gaggacttctccggctccatgtcgctgagcttctcggatccgcgcttcgacgaggtcaag
gccccggtcgacgagtgcaaagacaaggacatgacgtacgcggccccgctgttcgtcacg
gccgagttcatcaacaacaacaccggcgagatcaagagccagacggtcttcatgggtgac
ttcccgatgatgaccgagaagggcaccttcatcatcaacggcaccgagcgtgtcgtggtg
agccagctggtccgttcgccgggtgtgtacttcgactcgtcgatcgacaaggcgaccgag
aaggacctgcacagcgtcaaggtcatcccgggccgcggcgcgtggctggagttcgacgtc
gacaagcgcgacaccgtcggtgtgcgcatcgaccgcaagcgccgccagcccgtcaccgtg
ctgctcaaggcgctcggctggaccaacgagcagatcaccgagcgcttcggcttctccgag
atcatgatgagcacgctggagaaggacaacaccgccggtaccgacgaggcgctgctggac
atctaccggaagctgcgcccgggcgagcccccgaccaaggagtcggcgcagaccctgctg
gagaacctgttcttcaaggacaagcgctacgacctggcccgcgtgggccggtacaaggtg
aacaagaagctcggcctgaacgcgggccagccgatcaccaactcgacgctgaccgaagag
gacgtcgtcgccaccatcgagtacctggtgcgtctgcaccagggcgacaaggtgatgacc
gcgcccggtggtgtcgaggtgcccgtcgaggtcgacgacatcgaccacttcggtaaccgt
cgtctgcgcaccgtcggcgagctgatccagaaccagatccgggtcggcctgtcgcgtatg
gagcgtgtcgtgcgtgagcgcatgaccacccaggacgtcgaggcgatcaccccgcagacc
ctgatcaacatccgtcccgtcgtggcggcgatcaaggagttcttcgggaccagccagctg
tcgcagttcatggaccagaacaacccgctgtcgggtctgacccacaagcgccgtctgtcg
gcgctgggccccggcggtctgtcccgtgagcgtgccggcctcgaggtccgtgacgtgcac
tccagccactacggccggatgtgcccgatcgagaccccggaaggcccgaacatcggcctg
atcggttcgctgtcggtgtacgcacgggtcaacccgttcggcttcatcgagacgccgtac
cgcaaggtcaccgacggtgtggtcaccgaccagatcgactacctgaccgccgacgaggag
gaccgccacatcgtggcgcaggccaactcgccgctggacgccaacggccgcttcgaggag
gaccgcatcctggtccgccgtaagggtggcgaggtcgagttcgtcgccgccgaagacgtg
gattacatggacgtctcgccgcgccagatggtgtcggtcgcgacggcgatgatcccgttc
ctcgagcatgacgacgccaaccgtgccctgatgggtgccaacatgcagcgccaggccgtt
ccgctggtccgcagcgaggccccgctggtcggtaccggcatggaattgcgtgccgccatc
gacgccggtgacgttgtcgtcgccgacaagaccggtgtcatcgaagaggtctcggccgac
tacatcaccgtgatggccgatgacggcagccgccagacctaccggatgcgcaagttcgcc
cggtccaaccacggcacgtgcgccaaccagcgcccgatcgtggacaccggacagcgtgtc
gaggccggccaggttctggccgacggtccgtgcaccgagaacggtgagatggcgctgggc
aagaacctgctcgtcgccgtcatgccgtgggaggggcacaactacgaggacgcgatcatc
ctctccagccgtctggttgaagaagacgtgctcacctcgattcacatcgaagagcacgag
atcgatgcccgcgacaccaagctgggcgccgaggagatcacccgggatatcccgaacgtc
tccgatgaagtgctggccgatctcgacgagcgcggcatcatccgcatcggcgccgaggtc
cgcgacggcgacatcctggtcggcaaggtcaccccgaagggcgagaccgagctgaccccg
gaagagcgcctgctgcgtgccatcttcggtgaaaaggcccgtgaggtccgcgacacgtcg
ctcaaggtgccccacggcgagtccggcaaggtcatcggtatccgcgtgttctcccgcgag
gatgacgacgagctgcccgccggtgtcaacgaactggtccgcgtctacgtggcccagaag
cgcaagatctccgacggcgacaagctcgccggacgccacggcaacaagggcgtcatcggc
aagatcctgccgatcgaggacatgcccttcatgcccgatggcaccccggtggacatcatc
ctgaacacccacggtgtgccgcgtcgtatgaacatcggccagatcctggaaacccacctc
gggtgggtcgccaaggccggctggaacattgagggttcacccgaatgggcggcgaagctg
cccgaggggatgcagtcggctccggccgacagcatcgtggccaccccggtgttcgacggc
gcgcaggagaaggagctcgaaggcctgctcggctcgacgctgcccaaccgcgacggtgac
gtcatggtcaacgcgcagggcaagtccgagctgttcgacggccgcagtggcgaaccgttc
ccgtacccggtgacggtcggctacatgtacatcctgaagctgcaccacctggtcgacgac
aagatccacgcccgttcgaccggtccgtactcgatgatcacccagcagccgctcggtggt
aaggcgcagttcggtggtcagcggttcggtgagatggagtgctgggccatgcaggcctac
ggcgcggcgtacacgctgcaggagctgctcaccatcaagtccgacgacacggtgggtcgc
gtcaaggtgtacgaggcaatcgtcaagggcgagaacatccccgagccgggcatcccggag
tcgttcaaggtgcttctcaaggagctgcagtcgctctgcctgaacgtcgaggtgctgtct
tcggacggcgcggcgatcgagatgcgtgacggagacgacgaggacctggagcgcgccgct
gccaacctcggaatcaacctgtcgcgcaacgaatccgcctctgtcgaagatctggcctaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (17)   

Download RDF
DBGET integrated database retrieval system