KEGG   Methylobacterium nodulans: Mnod_1932
Entry
Mnod_1932         CDS       T00839                                 
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit
  KO
K03040  DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
Organism
mno  Methylobacterium nodulans
Pathway
mno03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:mno00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    Mnod_1932
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mno03021]
    Mnod_1932
   03400 DNA repair and recombination proteins [BR:mno03400]
    Mnod_1932
Enzymes [BR:mno01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     Mnod_1932
Transcription machinery [BR:mno03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     Mnod_1932
DNA repair and recombination proteins [BR:mno03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      Mnod_1932
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_A_CTD RNA_pol_L RNA_pol_L_2 IDH
Other DBs
NCBI-ProteinID: ACL56921
UniProt: B8IT35
Position
2027787..2028806
AA seq 339 aa
MVIQKNWQELIKPNKLEVAPGHDPKRIATVVAEPLERGFGTTLGNALRRVLLSSLQGAAV
TSVHIDGVLHEFSSIPGVREDVTDIVLNIKTIAIRSSSDTPKRMTLRKTGPGLVTAGDIS
TIGDIQILNPDLVLCTLDEGAEIRMEFTVATGKGYVPADRNRPEDAPIGLIPVDALFSPV
TKVSYRIENTREGQDLDKDKLTMTVETNGAVSPEDALAYAARIIQDQLQIFVNFEEPRKE
EAAPLAPQLPFNPALLKKVDELELSVRSANCLKNDNIVYIGDLIQKTEAEMLRTPNFGRK
SLNEIKEVLAAMGLHLGMDVPGWPPENIEDLAKRFEEHY
NT seq 1020 nt   +upstreamnt  +downstreamnt
gtggtgattcagaagaactggcaagagctgatcaagccgaacaagctcgaagtcgccccg
gggcacgaccccaagcgcatcgcgaccgtggtggccgagccgcttgagcgcggcttcggc
acgaccctcggcaacgcgctgcgccgcgtgctgctgtcctcgctccagggcgcggccgtg
acctcggtccatatcgacggcgtgctgcacgaattctcgtcgatccccggcgtgcgcgag
gacgtcaccgacatcgtcctcaacatcaagaccatcgcgatccggtcgagcagcgacacg
cccaagcgcatgacgctgcgcaagaccgggccgggcctcgtcacggcgggcgacatcagc
acgatcggcgacatccagatcctcaaccccgatctcgtgctctgcacgctcgacgaaggg
gcggagatccgcatggagttcacggtcgccaccggcaagggctacgtcccggccgaccgc
aaccggcccgaggacgcgccgatcggcctcatcccggtcgacgccctgttctcgcccgtc
accaaggtgtcctaccgcatcgagaacacccgcgagggccaggatctcgacaaggacaag
ctgaccatgacggtcgagaccaacggcgcggtctcgccggaggatgcgctcgcctacgcg
gcccgcatcatccaggatcagctccagatcttcgtgaacttcgaggagccccgcaaggag
gaggccgcaccgcttgcgccgcagctccccttcaacccggcgctgctcaagaaggtggac
gaactcgaactgtcggtccgctcggcgaactgcctgaagaacgacaacatcgtctatatc
ggcgacctcatccagaagacggaagccgagatgctgcgcacgccgaatttcggccgcaag
tcgctcaacgagatcaaggaggtgctcgccgccatgggcctgcacctcggcatggacgtt
cccggctggccgccggagaacatcgaggacctcgccaagcggttcgaggagcactactga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (5)   
   Pfam (5)   
All databases (17)   

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