KEGG T00839: Mnod

Methylobacterium nodulans: Mnod_7647

Entry

Mnod_7647 CDS T00839

Definition

DNA polymerase LigD, polymerase domain-containing protein

Orthology

K01971

DNA ligase (ATP) [EC:6.5.1.1]

Organism

mno Methylobacterium nodulans

Pathway

mno03410	Base excision repair
mno03420	Nucleotide excision repair
mno03430	Mismatch repair

Class

Genetic Information Processing; Replication and repair; Base excision repair [PATH:mno03410]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:mno03420]
Genetic Information Processing; Replication and repair; Mismatch repair [PATH:mno03430]
Genetic Information Processing; Replication and repair; Non-homologous end-joining

SSDB

Motif

Pfam:

LigD_N DNA_primase_S

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

complement(7743772..7745406)

AA seq 544 aa
MSTAPGQTEDTLASYNRKRDFTQTAEPKGRVTSGGGHRFVVQKHAARRLHYDFRLELDGV
LLSWAVARGPSLDPADKRLAVRTEDHPVAYADFEGTIPQGNYGAGTVMLWDRGTWSPDGD
PHEAIKNGRLRFTLHGERMRGAWLLIRMKGSKRENWLLRKLEDDEANRDSDLTQSHTSSI
TTGRSLEQIAAGERTSTRRSSNLAASRPMPLEHRAEPPIPVSLRDDKPADEVRAEHAQPV
VQATKRARARAAERAMISHGVRITSPDRQPYPQAKVSKRDLVAYYEQVSVVMLPHISGRP
LTLIRCPRGVDARCFVQQHAAPGFPEAVRTVSITEASGETQNHIYVEDLAGILACVQIGA
LEFHGWGARAGALEVPDRLVLDLDPDPAVAFGAVVDAALFIRDRLLEDGLSSWPMLSGGK
GVHVIVPLTGATWPAVSAYAKQLAQAMEKQAPERFTAEMAKTDRSGRIFIDYLRNQRGAT
AVMPYSTRAKASASIAMPLDWDRLGQTTSAQAYTVHDVLEKGLPEVAEQASAPQRLPRSS
PGGE

NT seq 1635 nt +upstreamnt +downstreamnt
atgagcacagcaccaggccagacagaagacactctcgcctcctacaacaggaagcgagac
ttcacacagacggcagagccgaaggggcgcgtgacaagcgggggtggccaccgctttgtc
gtccagaagcatgcggcgaggcgcctgcactacgacttccgcctggagctcgacggtgtt
ctgctcagttgggccgtcgcgcgcgggccgagtctcgaccccgctgacaagcggctcgcg
gtccgcacggaggatcatcccgtagcctatgccgacttcgaaggaaccatcccgcagggc
aactacggcgcagggacggtgatgctgtgggatcgcggaacgtggtcgcctgacggagat
ccacacgaggcaatcaaaaacggcaggctgcgcttcactcttcatggagagcgcatgcgc
ggcgcttggctgctgatccgaatgaagggtagcaagcgcgagaactggctcctgcgcaag
cttgaggacgacgaggcgaacagggacagcgatctcactcagagccatacatcgagcatc
acgacgggccgctctttggagcagatcgctgcgggagagcgcacctcgacacgacgctcg
tcaaaccttgccgcatcgcggcccatgccgctcgagcatcgcgccgagccaccaattcct
gtcagcttgcgcgatgacaagcccgcggacgaggtgagggctgagcacgcgcagccagtc
gtgcaggccaccaagcgtgcaagagcgagagcagccgaaagggcgatgatctcgcacggc
gtgcggatcaccagccccgaccgtcagccgtacccgcaggccaaggtcagcaagcgcgat
ctcgtggcctactacgagcaggtctctgtggtgatgctgccgcacatctcaggccggccg
ctcacgctgatccgctgcccgcgcggcgttgatgcacgctgcttcgtccagcagcacgcc
gcccctgggttcccggaggccgttcggacggtgagcatcaccgaggcgtctggcgagacg
cagaaccacatctacgtcgaagacttggcgggcatcttggcctgcgtgcagatcggagcc
ctcgagtttcacggctggggagcgcgtgccggcgcgcttgaggtgccggatcgtctcgtc
ctcgacctcgatcccgatccggccgtggcgttcggcgcagtggtggatgccgctctgttc
attcgcgaccgtctgctggaggacggcctgagctcatggccgatgctgtcgggtggcaaa
ggcgtacacgtgatcgtgccgctgaccggggcgacgtggccggcggtcagtgcttatgca
aagcagctggcgcaggcgatggagaaacaggcgcccgagcggttcacggcggagatggcg
aagaccgatcggtccggacggatcttcatcgactacctgcgcaaccagcgtggagcgacc
gccgtgatgccctactcgacgcgagcgaaggccagcgcgtcgattgcgatgccgctcgac
tgggaccggctcgggcagaccacgtccgctcaagcctacacagtccatgatgttctcgag
aaagggctgcccgaggtggccgagcaggcaagtgcgccgcagcgactgccgaggagttcc
ccaggcggagagtag

All links

Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-MNO (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (14)   

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