KEGG   Massilia sp. NR 4-1: ACZ75_22365
Entry
ACZ75_22365       CDS       T04026                                 
Symbol
rho
Name
(GenBank) transcription termination factor Rho
  KO
K03628  transcription termination factor Rho
Organism
mnr  Massilia sp. NR 4-1
Pathway
mnr03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:mnr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    ACZ75_22365 (rho)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mnr03021]
    ACZ75_22365 (rho)
   03019 Messenger RNA biogenesis [BR:mnr03019]
    ACZ75_22365 (rho)
Transcription machinery [BR:mnr03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     ACZ75_22365 (rho)
Messenger RNA biogenesis [BR:mnr03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     ACZ75_22365 (rho)
SSDB
Motif
Pfam: Rho_RNA_bind ATP-synt_ab Rho_N AAA_25 OB_RNB NACHT AAA_22
Other DBs
NCBI-ProteinID: AKU23792
UniProt: A0A0K1K321
Position
complement(5329427..5330689)
AA seq 420 aa
MHLSELKAMHVSALLEMAIGLDIDNAARLRKQELMFAILKKRAKAGEQIFGDGALEVLPD
GFGFLRSPDASYMASTDDIYISPSQIRRFNLHTGDSIEGEVRTPKDGERYFALVKVDKVN
GESPEASKHRILFENLTPLHPQEPLRLEREMNGAENITGRIIDLISPIGKGQRGLLVASP
KSGKSVMLQHIAHAITANHPDVTLIVLLIDERPEEVTEMQRSVRGEVVASTFDEPATRHV
QVAEMVLEKAKRLVEMKKDVVILLDSITRLARAYNTVIPASGKVLTGGVDANALQRPKRF
FGAARNVEEGGSLTIVATALIETGSRMDDVIYEEFKGTGNMEVHLERRLAEKRVYPSINL
NKSGTRREELLIKPDQLQKIWILRKLLYSMDEIEAMEFILDKMKSTKTNLEFFDLMRRGG
NT seq 1263 nt   +upstreamnt  +downstreamnt
atgcatctatctgaacttaaggctatgcacgtttccgccttgctggaaatggctatcggt
cttgacatcgacaatgcggctcgcctgcgcaagcaggaactgatgttcgcaatcctgaag
aaacgcgccaaagccggcgagcagattttcggcgacggcgccctggaagtgctgccggac
ggcttcggcttcctgcgctcgcccgacgccagctacatggcctcgaccgacgacatctac
atctccccctcccagatccgccgcttcaatctgcacaccggcgactcgatcgagggcgag
gtgcgtactcccaaggatggcgaacgctatttcgccctggtcaaggtagacaaggtcaac
ggcgaatcgccggaagcctcgaagcaccgcattctgtttgagaacctgacgccgctgcac
ccgcaggaaccgctgcgcctggagcgcgagatgaacggcgccgagaacatcaccggccgc
atcatcgacctgatttcgccgatcggcaaaggccagcgcggcctgctggtcgcctcgccg
aagtccggcaaatccgtgatgctgcagcatatcgcccacgccatcaccgccaaccacccc
gacgtcaccctgatcgtgctgctgatcgacgaacgtccggaagaggtgacggagatgcaa
cgctcggtgcgcggcgaagtggtggcctccaccttcgacgaaccggccacccgccacgtg
caggtcgccgagatggtgctggagaaagccaagcgcctggtcgaaatgaaaaaagacgtg
gtcatcctgctggactcgatcacccgtctggcgcgcgcctacaacaccgtgatcccggct
tccggcaaagtgctgaccggcggtgtcgacgccaacgccctgcagcgtccgaagcgcttc
ttcggcgccgcgcgtaatgtggaagaaggcggctcgctgaccatcgtcgccaccgcgctg
atcgaaaccggttcgcgcatggacgacgtaatttacgaagaattcaagggtactggcaat
atggaggtgcacctggagcgccgcctggccgaaaaacgcgtctacccgtcgatcaacctg
aacaaatcgggcacccgccgcgaagagctgctgatcaagccggaccagctgcagaagatc
tggatcctgcgcaagctgctgtactcgatggacgagatcgaagcgatggagttcatcctc
gacaagatgaagtcgacgaagaccaatctggaattcttcgacctgatgcgccgcggcggc
tga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (8)   
   KEGG ORTHOLOGY (1)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (21)   

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