KEGG   Mesorhizobium opportunistum: Mesop_3551
Entry
Mesop_3551        CDS       T01542                                 
Name
(GenBank) DNA ligase, NAD-dependent
  KO
K01972  DNA ligase (NAD+) [EC:6.5.1.2]
Organism
mop  Mesorhizobium opportunistum
Pathway
mop03030  DNA replication
mop03410  Base excision repair
mop03420  Nucleotide excision repair
mop03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:mop00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Mesop_3551
   03410 Base excision repair
    Mesop_3551
   03420 Nucleotide excision repair
    Mesop_3551
   03430 Mismatch repair
    Mesop_3551
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mop03032]
    Mesop_3551
   03400 DNA repair and recombination proteins [BR:mop03400]
    Mesop_3551
Enzymes [BR:mop01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.2  DNA ligase (NAD+)
     Mesop_3551
DNA replication proteins [BR:mop03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     Mesop_3551
DNA repair and recombination proteins [BR:mop03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA ligase
     Mesop_3551
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Mesop_3551
   MMR (mismatch excision repair)
    DNA ligase
     Mesop_3551
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      Mesop_3551
SSDB
Motif
Pfam: DNA_ligase_aden DNA_ligase_OB HHH_2 BRCT DNA_ligase_ZBD PTCB-BRCT RUBY_RBDX
Other DBs
NCBI-ProteinID: AEH87993
UniProt: F7YFW2
Position
3660909..3663113
AA seq 734 aa
MAEKPVDSLSESEAEAELQRLAEEIAEHDRRYHTEDAPTITDAEYDALRRRNLAIEERFP
GLVREDSPSLRVGAAPAEGFAKVRHAVPMLSLAKAYTDEDVTDFIERGRRFFDRDKDLDI
AFTAEPKIDGLSASLRYEKGVFVQGATRGNGTVGEDITANLRTIADIPAKLKGSGWPEII
EIRGEVYMTYAEFEALKARSAAAGGQDYVNPRNTAAGSLRQKDASVTASRNLKFFAYAWG
YTTEDPAPTQYGAVQKFADWGFKISPLMVRAKSVEELVAHYHRIEEQRSSLGYDIDGVVY
KVDQLELQRRWGFVTGEPRWAIAHKFPAEQAMTTVQKIDIQVGRTGTLAPVARLAPVTVG
GVVVENVTLHNEDYIKGFDSNGQPIRDGIDVRIGDTVVIQRAGDVIPQIVSVVIDKRPAD
ATPYEFPHTCPVCGSPATREINEKTGKEDSRRRCTGELICAAQAVERLRHFVSRGALDIE
GLGAENIDTFFNAGLIKTAADIFTLRDRRPAVTKALAERREEQARQREAASGKTRKNVRS
VEDRNYEGLDKLFAAIDSRREPELDRFIFALGIRHIGETTAALLARTFSTIEELIRVGKE
TAAAEDPHTVFPSINGIGDTVIDALRDFFGNQRNDDVLEKLLEQVKPKPYIVTVSADSEV
AGKTIVFTGTLEKMTRSEAKAMAERLGAKVAGSVSAKTDLLVAGPGAGSKLKLASELGVE
VIDEDTWLQRVGKS
NT seq 2205 nt   +upstreamnt  +downstreamnt
atggccgaaaaacctgtcgattcgctcagcgaaagcgaggccgaagccgagcttcagcgg
ctggcggaggagatcgccgagcatgaccggcgttatcacacggaagacgcaccaacgatc
acggacgccgaatatgacgcgctgcggcgtcgcaacctggccatcgaggagcgctttccc
ggccttgtacgcgaggattcgccgtcgctcagggtcggggccgcgccggcggaaggcttc
gctaaggtgcgccacgcggtgccgatgctcagcttggccaaggcctataccgacgaggac
gtcaccgatttcatcgagcgcggccggcggttcttcgaccgcgacaaggacctcgacatc
gccttcaccgccgagccgaagatcgacggactgtcggcatcgctgcgctacgagaaaggc
gtattcgtgcaaggcgccacgcgtggcaacggtacggtaggtgaggacatcaccgccaat
ctgaggaccatcgccgacattcccgcgaagctgaaaggctcgggctggccggaaatcatc
gagatacgcggcgaggtctacatgacctatgccgagttcgaggcgctgaaggcacgctcg
gcggcggccggcggccaggactacgtcaatccgcgcaacacggctgccggctcgctgcgc
cagaaggacgcctccgtcaccgccagccgtaacctcaaattcttcgcctacgcctggggc
tacacgacggaagatccggcaccgacccagtacggtgccgtgcagaaattcgccgattgg
gggttcaagatcagccccttgatggtgcgggcgaagtcggtcgaggaactggtcgcgcac
tatcaccggatcgaagagcagcgctcctcgctgggctacgacatcgacggcgtcgtctac
aaggtcgaccagctggaactgcagcgccggtggggattcgtcaccggcgaaccgcgctgg
gctatcgcgcacaaattccccgccgaacaggcaatgacgaccgtgcagaagatcgacatc
caggtcggccgcaccggcacgttggcgccggtggcgcgtctggcaccggtgacggtcggc
ggcgtggtggtcgagaacgtcacgctgcacaatgaggattacatcaagggtttcgacagc
aacggccagccgatccgcgacggcatcgacgtgcgcatcggcgacacggtggtgatccag
cgcgccggggacgtcattccgcagatcgtcagcgtcgtcatcgacaagcgtccggccgac
gctaccccttacgagttcccgcacacctgcccggtttgcggttcgccggcgacgcgcgaa
atcaacgagaagaccggcaaggaggattcgcggcgacgctgcacgggcgaactgatctgt
gccgcgcaagccgtggaacgattgcgccatttcgtctcgcgcggcgccttggacatcgaa
ggccttggcgcggaaaacatcgataccttcttcaatgccgggttgatcaagacggccgcc
gatatcttcacgctcagggatcgccggccagccgtcaccaaggcgctggccgagcggcgc
gaggagcaggccaggcagcgcgaggcggcatccggcaagacgcgcaagaatgtccgcagc
gtcgaggaccgcaactatgaaggcctggacaagctcttcgcagccatcgattcgcgccgc
gaaccggaactcgaccgcttcatcttcgcattgggcatccgccatatcggcgagacgacg
gcggctttgctcgcccgcaccttctcgaccatcgaggaattgatccgcgtcggcaaggag
acggccgcggcggaagatccgcacaccgtgttcccgtcgatcaacggcatcggcgacacg
gtgatcgatgcgctgcgcgatttcttcggcaatcagcgcaatgacgacgtccttgagaag
ctgctcgagcaggtcaagccgaagccgtacatcgtcaccgtctcggccgacagcgaggtc
gccggcaagacgatcgtgttcaccggcacgctggagaagatgacccgctccgaagccaag
gcgatggccgagcgtctcggcgccaaggtcgccggctcggtttcggcgaagaccgacctg
ctggtggcggggcctggtgcgggctcgaagctcaagctcgccagcgaactcggcgtcgag
gtcatcgacgaggacacctggctgcagcgggtcggcaagtcctga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (4)   
   KEGG PATHWAY (4)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (27)   

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